DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csk and Lck

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001155904.1 Gene:Lck / 16818 MGIID:96756 Length:520 Species:Mus musculus


Alignment Length:492 Identity:170/492 - (34%)
Similarity:256/492 - (52%) Gaps:58/492 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   588 SGSQHGSNMLLHTAPQPPQAS-QPAAVVGVSGSGSAGMSTSLHSFDIN-----GVTAGSGV---- 642
            :||:....::.:....||.:. |...|:            :|||::.:     |...|..:    
Mouse    51 NGSEVRDPLVTYEGSLPPASPLQDNLVI------------ALHSYEPSHDGDLGFEKGEQLRILE 103

  Fly   643 NASSAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAM---PWFHGSITRDEAE-HLLQP-RE 702
            .:...|.:.|.|......:....:|          |.|::   |||..:::|.:|| .||.| ..
Mouse   104 QSGEWWKAQSLTTGQEGFIPFNFVA----------KANSLEPEPWFFKNLSRKDAERQLLAPGNT 158

  Fly   703 DGLFLVRESTNFPGDYTLCV-CFQSK----VEHYRVKYLEN-KLTIDDEEYFENLGQLVAHYEAD 761
            .|.||:|||.:..|.::|.| .|...    |:||:::.|:| ...|.....|..|..||.||...
Mouse   159 HGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHDLVRHYTNA 223

  Fly   762 ADGLCTQLIKCLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGKGEFGDVMLGILR-NEKVA 825
            :|||||:|.:.......|      |.:.:..|.:|...|:|.|.:|.|:||:|.:|... :.|||
Mouse   224 SDGLCTKLSRPCQTQKPQ------KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA 282

  Fly   826 VKMLKDEGAV--QKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQ 888
            ||.|| :|::  ..|||||::|..|:|..||:...:| |.:.:|::||||..|||||:|::....
Mouse   283 VKSLK-QGSMSPDAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGI 345

  Fly   889 HITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR---EECYNLDVG 950
            .:.....:..|...|.||.::|.:..:||||.|.|:|:|:....|::||||||   :..|....|
Mouse   346 KLNVNKLLDMAAQIAEGMAFIEEQNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 410

  Fly   951 -KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEG 1014
             |.|||||||||:..|.|:.|||:|||||||.||.:.||:|||.:...:|::::|.||:|..|:.
Mouse   411 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 475

  Fly  1015 CPPEIYEMMRQAWDLNPAKRPTFAELKVKLQLLNNAT 1051
            ||.|:|.:|...|...|..||||..|:..|.....||
Mouse   476 CPEELYHLMMLCWKERPEDRPTFDYLRSVLDDFFTAT 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 38/107 (36%)
PTKc_Csk_like 793..1047 CDD:270635 112/260 (43%)
STYKc 800..1044 CDD:214568 109/250 (44%)
LckNP_001155904.1 SH3_Lck 76..129 CDD:212938 10/74 (14%)
SH2_Src_Lck 134..234 CDD:198225 37/99 (37%)
PTKc_Lck_Blk 248..511 CDD:270652 112/264 (42%)
Pkinase_Tyr 256..505 CDD:285015 109/250 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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