DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csk and Lck

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001155904.1 Gene:Lck / 16818 MGIID:96756 Length:520 Species:Mus musculus


Alignment Length:492 Identity:170/492 - (34%)
Similarity:256/492 - (52%) Gaps:58/492 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   588 SGSQHGSNMLLHTAPQPPQAS-QPAAVVGVSGSGSAGMSTSLHSFDIN-----GVTAGSGV---- 642
            :||:....::.:....||.:. |...|:            :|||::.:     |...|..:    
Mouse    51 NGSEVRDPLVTYEGSLPPASPLQDNLVI------------ALHSYEPSHDGDLGFEKGEQLRILE 103

  Fly   643 NASSAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAM---PWFHGSITRDEAE-HLLQP-RE 702
            .:...|.:.|.|......:....:|          |.|::   |||..:::|.:|| .||.| ..
Mouse   104 QSGEWWKAQSLTTGQEGFIPFNFVA----------KANSLEPEPWFFKNLSRKDAERQLLAPGNT 158

  Fly   703 DGLFLVRESTNFPGDYTLCV-CFQSK----VEHYRVKYLEN-KLTIDDEEYFENLGQLVAHYEAD 761
            .|.||:|||.:..|.::|.| .|...    |:||:::.|:| ...|.....|..|..||.||...
Mouse   159 HGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHDLVRHYTNA 223

  Fly   762 ADGLCTQLIKCLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGKGEFGDVMLGILR-NEKVA 825
            :|||||:|.:.......|      |.:.:..|.:|...|:|.|.:|.|:||:|.:|... :.|||
Mouse   224 SDGLCTKLSRPCQTQKPQ------KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVA 282

  Fly   826 VKMLKDEGAV--QKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQ 888
            ||.|| :|::  ..|||||::|..|:|..||:...:| |.:.:|::||||..|||||:|::....
Mouse   283 VKSLK-QGSMSPDAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGI 345

  Fly   889 HITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR---EECYNLDVG 950
            .:.....:..|...|.||.::|.:..:||||.|.|:|:|:....|::||||||   :..|....|
Mouse   346 KLNVNKLLDMAAQIAEGMAFIEEQNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 410

  Fly   951 -KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEG 1014
             |.|||||||||:..|.|:.|||:|||||||.||.:.||:|||.:...:|::::|.||:|..|:.
Mouse   411 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 475

  Fly  1015 CPPEIYEMMRQAWDLNPAKRPTFAELKVKLQLLNNAT 1051
            ||.|:|.:|...|...|..||||..|:..|.....||
Mouse   476 CPEELYHLMMLCWKERPEDRPTFDYLRSVLDDFFTAT 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 38/107 (36%)
PTKc_Csk_like 793..1047 CDD:270635 112/260 (43%)
LckNP_001155904.1 SH3_Lck 76..129 CDD:212938 10/74 (14%)
SH2_Src_Lck 134..234 CDD:198225 37/99 (37%)
PTKc_Lck_Blk 248..511 CDD:270652 112/264 (42%)

Return to query results.
Submit another query.