DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and Fyn

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_030100741.1 Gene:Fyn / 14360 MGIID:95602 Length:576 Species:Mus musculus


Alignment Length:532 Identity:181/532 - (34%)
Similarity:260/532 - (48%) Gaps:98/532 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   588 SGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGVNASSA----- 647
            ||.::|      |.|.|    |.....||:   |.....:.|:....|:|...|||:||.     
Mouse    65 SGYRYG------TDPTP----QHYPSFGVT---SIPNYNNFHAAGGQGLTVFGGVNSSSHTGTLR 116

  Fly   648 ------------------------------------------WSSGSTTAMNHASLSPTALAPQQ 670
                                                      |.:.|.|......:....:||..
Mouse   117 TRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPVD 181

  Fly   671 GRSRCEVKLNAMPWFHGSITRDEAEHLL----QPREDGLFLVRESTNFPGDYTLCV-----CFQS 726
                   .:.|..|:.|.:.|.:||..|    .||  |.||:|||....|.|:|.:     ....
Mouse   182 -------SIQAEEWYFGKLGRKDAERQLLSFGNPR--GTFLIRESETTKGAYSLSIRDWDDMKGD 237

  Fly   727 KVEHYRVKYLEN-KLTIDDEEYFENLGQLVAHYEADADGLCTQLI----KCLPKLGKQEFCINSK 786
            .|:||:::.|:| ...|.....||.|.|||.||...|.|||.:|:    |.:|:|  .:..:.:|
Mouse   238 HVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLCCRLVVPCHKGMPRL--TDLSVKTK 300

  Fly   787 DFVDKGWVIPEAELQLRESIGKGEFGDVMLGILR-NEKVAVKMLKDEGAV--QKFLAEASVMTTL 848
            |.    |.||...|||.:.:|.|:||:|.:|... |.|||:|.|| .|.:  :.||.||.:|..|
Mouse   301 DV----WEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKL 360

  Fly   849 EHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKK 913
            :||.||:...:| :.:.:|:||||||||||:|:|:....:.:...:.:..|...|:||.|:|...
Mouse   361 KHDKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 424

  Fly   914 VVHRDLAARNVLISEDCVAKVSDFGLAR---EECYNLDVG-KLPIKWTAPEALKNGRFSNKSDMW 974
            .:||||.:.|:|:....:.|::||||||   :..|....| |.|||||||||...|||:.|||:|
Mouse   425 YIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 489

  Fly   975 SFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAE 1039
            ||||||.|:.:.||||||.:...:|::.||.||:|..|:.||..::|:|...|..:|.:||||..
Mouse   490 SFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEY 554

  Fly  1040 LKVKLQLLNNAT 1051
            |:..|:....||
Mouse   555 LQGFLEDYFTAT 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 39/110 (35%)
PTKc_Csk_like 793..1047 CDD:270635 114/260 (44%)
FynXP_030100741.1 SH3_Fyn_Yrk 124..179 CDD:212939 3/54 (6%)
SH2_Src_Fyn_isoform_a_like 184..284 CDD:198281 37/101 (37%)
PTKc_Fyn 300..573 CDD:270655 118/273 (43%)

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