DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and Fgfr2

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_034337.2 Gene:Fgfr2 / 14183 MGIID:95523 Length:840 Species:Mus musculus


Alignment Length:853 Identity:217/853 - (25%)
Similarity:348/853 - (40%) Gaps:248/853 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 GQTTVVGHHRGFSQPSVTVAA---AAATGSTAGDPWFLQTTGHQMPPTAPLRHNKRPAPQPNA-V 400
            |..|:|...|......||:|.   |..:.|...|    .|...:.|||      |....||.| |
Mouse    16 GTVTMVSWGRFICLVLVTMATLSLARPSFSLVED----TTLEPEEPPT------KYQISQPEAYV 70

  Fly   401 LGAGS--------------SGTAPGSAVG----AVLLHQQ-QLSQSQPHIVPPSIPPHHHHHREN 446
            :..|.              |.|..|..:|    .||:.:. |:..:.|              |::
Mouse    71 VAPGESLELQCMLKDAAVISWTKDGVHLGPNNRTVLIGEYLQIKGATP--------------RDS 121

  Fly   447 NVHPIQAGAAAALHLSSHALNSHNLISSASNHSPKSPSQTQQQQQTTNQQ-----QQQQQQQASH 506
            .::...|............:|..:.|||..:......|:....:..:||:     ..::.::..|
Mouse   122 GLYACTAARTVDSETWYFMVNVTDAISSGDDEDDTDSSEDVVSENRSNQRAPYWTNTEKMEKRLH 186

  Fly   507 SILSTFAPAPTVAAVQPAGSQSVAGTAAAVAAVAQQQQQQHLQLLANCPPGGA-------GLMSS 564
            ::    ..|.||....|||..... |...:....:.:|:..:        ||.       .|:..
Mouse   187 AV----PAANTVKFRCPAGGNPTP-TMRWLKNGKEFKQEHRI--------GGYKVRNQHWSLIME 238

  Fly   565 SLNAAQMGMHGAERALPPKSLALSGSQHGSNMLLHT--------APQPP--QASQPA---AVVG- 615
            |:..:..|.:          ..|..:::||  :.||        :|..|  ||..||   .||| 
Mouse   239 SVVPSDKGNY----------TCLVENEYGS--INHTYHLDVVERSPHRPILQAGLPANASTVVGG 291

  Fly   616 ---------------------VSGSGS---------------AGMSTS---LHSFDINGVT---- 637
                                 |..:||               ||::|:   :....|..||    
Mouse   292 DVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLYIRNVTFEDA 356

  Fly   638 ------AGS--GVNASSAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEA 694
                  ||:  |::..|||          .::.|   ||.:     |.::.|.|.:     .:.|
Mouse   357 GEYTCLAGNSIGISFHSAW----------LTVLP---APVR-----EKEITASPDY-----LEIA 398

  Fly   695 EHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTIDDEEYFENL-------G 752
            .:.:     |:||:             .|....|...|:|....|.....:.....|       .
Mouse   399 IYCI-----GVFLI-------------ACMVVTVIFCRMKTTTKKPDFSSQPAVHKLTKRIPLRR 445

  Fly   753 QLVAHYEADAD-GLCTQLIKCLPKL----------GKQEFCINSKDFVDKGWVIPEAELQLRESI 806
            |:....|:.:. ...|.|::...:|          |..|:.:..    |..|..|..:|.|.:.:
Mouse   446 QVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVSEYELPE----DPKWEFPRDKLTLGKPL 506

  Fly   807 GKGEFGDVML----GILRNE-----KVAVKMLKDEGAVQK----FLAEASVMTTL-EHDNLVKFI 857
            |:|.||.|::    ||.:::     .||||||||: |.:|    .::|..:|..: :|.|::..:
Mouse   507 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLL 570

  Fly   858 GLVFTSKHLYLVTEYMSKGSLVDYLRSR--------------GRQHITKKDQIIFAYDTASGMEY 908
            |.......||::.||.|||:|.:|||:|              ..:.:|.||.:...|..|.||||
Mouse   571 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 635

  Fly   909 LEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYNLDV------GKLPIKWTAPEALKNGRF 967
            |.::|.:||||||||||::|:.|.|::|||||| :..|:|.      |:||:||.|||||.:..:
Mouse   636 LASQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVY 699

  Fly   968 SNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPA 1032
            :::||:||||:|:|||::.|..|||.||:.::.|.::.|::|:.|..|..|:|.|||..|...|:
Mouse   700 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPTNCTNELYMMMRDCWHAVPS 764

  Fly  1033 KRPTFAEL 1040
            :||||.:|
Mouse   765 QRPTFKQL 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 17/114 (15%)
PTKc_Csk_like 793..1047 CDD:270635 113/282 (40%)
Fgfr2NP_034337.2 Ig 50..143 CDD:472250 20/112 (18%)
Ig strand B 77..81 CDD:409353 0/3 (0%)
Ig strand C 88..92 CDD:409353 1/3 (33%)
Ig strand E 109..113 CDD:409353 0/3 (0%)
Ig strand F 123..128 CDD:409353 0/4 (0%)
Ig strand G 136..139 CDD:409353 0/2 (0%)
IgI_2_FGFR 173..267 CDD:409443 19/118 (16%)
Ig strand A 173..176 CDD:409443 0/2 (0%)
Ig strand A' 184..189 CDD:409443 1/8 (13%)
Ig strand B 193..201 CDD:409443 3/7 (43%)
Ig strand C 207..212 CDD:409443 1/4 (25%)
Ig strand C' 215..217 CDD:409443 0/1 (0%)
Ig strand D 226..229 CDD:409443 0/2 (0%)
Ig strand E 233..238 CDD:409443 1/4 (25%)
Ig strand F 247..254 CDD:409443 1/16 (6%)
Ig strand G 257..267 CDD:409443 4/11 (36%)
IgI_3_FGFR2 275..379 CDD:409444 23/113 (20%)
Ig strand A 275..278 CDD:409444 1/2 (50%)
Ig strand A' 282..286 CDD:409444 2/3 (67%)
Ig strand B 294..301 CDD:409444 0/6 (0%)
Ig strand C 305..312 CDD:409444 0/6 (0%)
Ig strand D 327..332 CDD:409444 0/4 (0%)
Ig strand E 344..349 CDD:409444 0/4 (0%)
Ig strand F 357..365 CDD:409444 1/7 (14%)
Ig strand G 368..376 CDD:409444 4/17 (24%)
PTKc_FGFR2 475..787 CDD:270679 116/304 (38%)

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