DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and LOC100491469

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_031750439.1 Gene:LOC100491469 / 100491469 -ID:- Length:489 Species:Xenopus tropicalis


Alignment Length:443 Identity:145/443 - (32%)
Similarity:216/443 - (48%) Gaps:59/443 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   577 ERALPPKSLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDING---VTA 638
            :|..|||.         |.:.:.|.....|.:.|:....|         |:|:||:...   :|.
 Frog    17 DRIWPPKR---------SGVYVSTVDLVIQDNYPSRTDRV---------TALYSFNARSTHELTI 63

  Fly   639 GSGVNASSAWSSG------STTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHL 697
            ..|.........|      ..|....:.|.|.:...|.........:.. ||:....:|::||.|
 Frog    64 EQGEELCMISDEGEYILARKLTGNMESGLVPASYVAQSSLPGGHYTIQE-PWYMEVASRNDAERL 127

  Fly   698 L--QPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVK-------YLENKLTIDDEEYFENLGQ 753
            |  .|...|.||||.|.:.||.|:|.|..:.||.|:.:.       |::|      |:.|.::.:
 Frog   128 LFSSPNAHGSFLVRPSDSTPGHYSLSVRNEDKVSHFCISVSPGGQFYIQN------EKVFASIEK 186

  Fly   754 LVAHYEADADGLCTQLIKCLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGKGEFGDVMLGI 818
            ||..|:.:     .:|||. |.|....:....:|    .|..|.:|.:|...:|.|.||:|..|:
 Frog   187 LVNFYKTN-----WKLIKS-PLLKPCVWVAYQRD----QWERPRSEFKLVRQLGAGNFGEVWEGL 241

  Fly   819 LRN-EKVAVKMLKDEGAVQK-FLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDY 881
            ..| :|||:|..|.:...:. |..|.:.:.||.|.||::...:....:.:|:|||.||||||:.:
 Frog   242 WNNKDKVAIKTFKQDNINESDFKKEVNALKTLCHKNLIQLYAVCSVGEPVYIVTELMSKGSLLQF 306

  Fly   882 LRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR---EE 943
            ||....:|:|....:......|.||.:||.:.||||||||||||:.|..|.||:||||||   ::
 Frog   307 LRGTEGRHLTAGSFMHIISQVAEGMVFLEKEHVVHRDLAARNVLVGEKLVCKVADFGLARILKDD 371

  Fly   944 CYNLDVG-KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIP 995
            .|:|... |:||||||||.|....:|.|||:||:||:::|:|..|::||...|
 Frog   372 LYSLQGNIKIPIKWTAPEVLTRSIYSTKSDVWSYGIVMYEVYMLGQMPYQGEP 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 33/105 (31%)
PTKc_Csk_like 793..1047 CDD:270635 90/209 (43%)
STYKc 800..1044 CDD:214568 87/202 (43%)
LOC100491469XP_031750439.1 SH3_Srms 46..100 CDD:212780 11/62 (18%)
SH2 113..191 CDD:417686 28/83 (34%)
PKc_like 216..>422 CDD:419665 89/205 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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