DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and ptk6

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_002942429.3 Gene:ptk6 / 100490792 XenbaseID:XB-GENE-22069031 Length:563 Species:Xenopus tropicalis


Alignment Length:381 Identity:136/381 - (35%)
Similarity:210/381 - (55%) Gaps:24/381 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   684 WFHGSITRDEAEHLL--QPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRV-KYLENKLTIDDE 745
            ||.|..:|.||.:||  :...:|.||:|.|......|.|.|..|....|::: :..|.:..:::.
 Frog   170 WFFGEKSRTEAVNLLMDEGNTNGSFLIRASDKHGILYVLSVRHQDSTRHFKIMRNPEGQFHLNNM 234

  Fly   746 EYFENLGQLVAHYEADADGLCTQLIKCLPKLGKQEFCINSKDFVD-------KGWVIPEAELQLR 803
            .:|.:|.|||..|       |.:.| | |.|...:.|:.::..|.       ..|..|..|..|.
 Frog   235 TFFPDLKQLVETY-------CKKPI
-C-PGLTLTKPCVKNEPVVSDLSPVPLDEWERPREEFTLV 290

  Fly   804 ESIGKGEFGDVMLGILRNE-KVAVKMLKDEGAVQK-FLAEASVMTTLEHDNLVKFIGLVFTSKHL 866
            :.:|.|.||.|..|:.:.: |||||.:|.:...|. |:.|.:.:.||.|.||:....:.......
 Frog   291 KRLGMGNFGQVHEGLWKGKLKVAVKTIKRDATSQDLFVKETAFLKTLHHKNLLSLYAVCSVGDPY 355

  Fly   867 YLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCV 931
            |:|||.:.:|.|::|||...:..:..:.|:..|...|.||.|||::..:||||||||||:..:.:
 Frog   356 YIVTELVPRGDLLNYLRDLEKDELDVEGQLDIATQVAEGMRYLESQNCIHRDLAARNVLMGRNNI 420

  Fly   932 AKVSDFGLARE--ECYNLDVGK-LPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPR 993
            .|::|||:||.  :.|.:...| :|.|||||||::.||::.|||:|||||||:||.|.|..|||.
 Frog   421 CKIADFGMARVILDSYYVSASKEIPFKWTAPEAVEYGRYTVKSDVWSFGILLYEIMSLGMQPYPA 485

  Fly   994 IPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQLLNN 1049
            :...:|::.:..|.:|:||..|...:|.:|...|..||.:||:|.:|:..|:.|:|
 Frog   486 LSNYEVLEFLNRGQRMKAPPSCSTRVYNIMLTCWAWNPNERPSFDDLRTMLENLSN 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 29/95 (31%)
PTKc_Csk_like 793..1047 CDD:270635 102/258 (40%)
STYKc 800..1044 CDD:214568 98/248 (40%)
ptk6XP_002942429.3 SH3 104..161 CDD:418401
SH2 168..252 CDD:214585 26/88 (30%)
STYKc 288..536 CDD:214568 98/247 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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