DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and si:ch73-340m8.2

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_002665190.3 Gene:si:ch73-340m8.2 / 100332982 ZFINID:ZDB-GENE-110411-209 Length:480 Species:Danio rerio


Alignment Length:391 Identity:139/391 - (35%)
Similarity:209/391 - (53%) Gaps:39/391 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   679 LNAMPWFHGSI-TRDEAEH-LLQP-REDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKL 740
            :.|.||:..:: ||.||:. ||:| .::|.|||.:... ...|.|.|.......|||:|..||  
Zfish    98 VEAEPWYFENVKTRVEAKRCLLRPENKEGAFLVWKCDE-NNHYYLSVKNGPHARHYRIKQGEN-- 159

  Fly   741 TIDDEEY-------FENLGQLVAHYEADADGLCTQLIKCLPKLGK---QEFCINSKDFVDKGWVI 795
               |:::       |::|.:|:..|.....|||.:|.:...||.:   |....:||..:|:    
Zfish   160 ---DQQFFLVHHTTFQSLRKLIEFYSKHEGGLCAKLHEACVKLDQPVPQTLSFDSKCEIDR---- 217

  Fly   796 PEAELQLRESIGKGEFGDVMLGILRN-EKVAVKMLK--DEGAVQKFLAEASVMTTLEHDNLVKFI 857
              :.|..::.:|.|||.||..|:..| .:||:|..|  :...:|   .|..:|..|.|:.|:|..
Zfish   218 --SSLTKQQKLGSGEFADVWQGLWNNTTEVAIKEFKGVNYSDIQ---TEIEIMKDLHHERLLKLY 277

  Fly   858 GLVFTSKHLYLVTEYMSKGSLVDY-LRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAA 921
            .:..||:.:.:|||.|..|||..: ||.:.:|.:.....:.||.....||.|:| .|:|||||.|
Zfish   278 AVCTTSQPMCIVTELMKNGSLKTFLLRHKEKQDLEFSLMLDFAIQITEGMIYIE-NKIVHRDLRA 341

  Fly   922 RNVLISEDCVAKVSDFGLAR-----EECYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLW 981
            .|:|::|....|::|||||:     .:..:.|| :||:||.|||...||.:::|||:|||||||.
Zfish   342 ENILLTEMQSCKIADFGLAQVNRPGNQRISSDV-RLPVKWMAPEIFDNGEYTSKSDVWSFGILLT 405

  Fly   982 EIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQL 1046
            ||.::|..|||.......|:.::.|.:|..|.|||..:|.:|...|..||.:||||.||:..|..
Zfish   406 EIVTYGDDPYPGQDKMSCVRGIQRGERMPRPAGCPESLYGIMLLCWKANPKERPTFTELREMLMA 470

  Fly  1047 L 1047
            |
Zfish   471 L 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 33/106 (31%)
PTKc_Csk_like 793..1047 CDD:270635 100/262 (38%)
STYKc 800..1044 CDD:214568 99/252 (39%)
si:ch73-340m8.2XP_002665190.3 SH2 99..192 CDD:301589 31/98 (32%)
Pkinase_Tyr 220..468 CDD:285015 99/252 (39%)
PKc_like 225..468 CDD:304357 98/247 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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