DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14712 and NUP153

DIOPT Version :9

Sequence 1:NP_650096.1 Gene:CG14712 / 41397 FlyBaseID:FBgn0037924 Length:1266 Species:Drosophila melanogaster
Sequence 2:NP_001265138.1 Gene:NUP153 / 9972 HGNCID:8062 Length:1506 Species:Homo sapiens


Alignment Length:1576 Identity:333/1576 - (21%)
Similarity:536/1576 - (34%) Gaps:491/1576 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DSTRIDASLLNNRPAASNFLRGLSPKGSNTSLNGTRTPERSLMNRS----------------ATS 64
            :|:.|....:...||.||   ...|..::|:.|......|..::||                :||
Human    92 ESSNITDGRITPEPAVSN---TEEPSTTSTASNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTS 153

  Fly    65 S---------STITRQKLNLSQVDPRTFADVHSSGLSSRI----VALSERSGL--------QRSM 108
            |         |.:...|.:.||.|....:.  :||.|||.    :.:|:.:.|        :||.
Human   154 SAFPIGSSGFSLVKEIKDSTSQHDDDNIST--TSGFSSRASDKDITVSKNTSLPPLWSPEAERSH 216

  Fly   109 SASNLYNPLTQPRRAPASPLPYKSRAPTLSITQIAPP----ERSFYSGNTL---------SSLLR 160
            |.|.  :..|..::...:...:.:.:|:|..:.|...    :..||.|.|.         .|.||
Human   217 SLSQ--HTATSSKKPAFNLSAFGTLSPSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLR 279

  Fly   161 SNSLVGLVPKTTEQEQLSRENRPILHPPHPQHESEPTRSVLEELKEIS-----RKRINTEDTQQA 220
            :......|.:..:.:|||.::..:        .|...|.:|:.|:::|     .|||.:..:...
Human   280 NTPYQAPVRRQMKAKQLSAQSYGV--------TSSTARRILQSLEKMSSPLADAKRIPSIVSSPL 336

  Fly   221 QDYTKRSCQQNVDFVDFVAHHRQQQKLRNLQQQQNQSFKRQRELTVSVPLRHHSTSLSAASPALQ 285
            .....||   .:|..||.|                   ||::..:...|::.    |....|...
Human   337 NSPLDRS---GIDITDFQA-------------------KREKVDSQYPPVQR----LMTPKPVSI 375

  Fly   286 HMNSNGTISPTQSPEQVAKRPNCSYSNDITSSLSSSCRHSNKRKLLDMRERFQHSKNDTLASGGS 350
            ..|.:....|:.:|....::.|....|..::....:......|   :.||......|.:|.:...
Human   376 ATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNR---EQRESGFSYPNFSLPAANG 437

  Fly   351 SPENSPENVAKIQRKVDAEAVSKAMSMPVVTVAAVPASRAISAPAIQKAVP------------QV 403
            ..........|::|:......||.:......:..:|  :.||:...|..:|            :|
Human   438 LSSGVGGGGGKMRRERTRFVASKPLEEERQGLTVLP--KLISSSCAQAIIPSWPLKVLRLQEMEV 500

  Fly   404 TEKPKLTLFNARQSQTIAEQPRPDLSSPEVDAGEYAGIQFVKPKQQNSMLAAKNPSVERTHKTKL 468
            ...||::|     ..|.:..|..:.||||:...        .|...||..|..| .|:.|..:. 
Human   501 PVLPKISL-----PITSSSLPTFNFSSPEITTS--------SPSPINSSQALTN-KVQMTSPSS- 550

  Fly   469 AIMLSGLKGELYLGEP-DELDAPAPKSAPAPVTLPTPVKPIIIAPVTTSTTTVTSTATISTSAPS 532
                        .|.| .:..:|..||..|.|..|:.:.       .|.:..|..||.:|.|:.:
Human   551 ------------TGSPMFKFSSPIVKSTEANVLPPSSIG-------FTFSVPVAKTAELSGSSST 596

  Fly   533 KPIILSNQVIKPADVPNTNSTGSVPKLVLGQPAPPAKTEQTPPKPIDKVPAAQADIPPKFE-LST 596
            ...|:|:.......|.:||...:.|:...|...|....::.....|.|.|...:   ||.: ::.
Human   597 LEPIISSSAHHVTTVNSTNCKKTPPEDCEGPFRPAEILKEGSVLDILKSPGFAS---PKIDSVAA 658

  Fly   597 KP--VTPATSSQPLISFGTPKSTAAPSFSFGSATNTTSS--------------------TIANIT 639
            :|  .:|...::|.||     |.::....||.:....||                    ..|.::
Human   659 QPTATSPVVYTRPAIS-----SFSSSGIGFGESLKAGSSWQCDTCLLQNKVTDNKCIACQAAKLS 718

  Fly   640 NTTTSKPIFSFGQTPANGPTVGGL-------SGF--------------------KTEAPATTSVS 677
            ...|:|      ||....|...|.       :||                    |.||....:..
Human   719 PRDTAK------QTGIETPNKSGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEAIKCVACE 777

  Fly   678 TTNPGTQVTSTTTFGVTPPKTTTTVAPTTTVSLNFGQPMPSFGAADTGVKPMFSFG-----KSNN 737
            |..|||.|....|..|......|..|.:::.::..|    :.|..|...:|:.|:.     .|||
Human   778 TPKPGTCVKRALTLTVVSESAETMTASSSSCTVTTG----TLGFGDKFKRPIGSWECSVCCVSNN 838

  Fly   738 LSSGTPTTNGSDAAAAKPAVFSFGGSTTQPAAAAPTPVFGSLSKPLG-----EGFASPGA----- 792
            .......:..|:    ||      ||:...::::..||    |.|.|     |.|..|..     
Human   839 AEDNKCVSCMSE----KP------GSSVPASSSSTVPV----SLPSGGSLGLEKFKKPEGSWDCE 889

  Fly   793 -----NKSETTKPSIFGNLDNGLGNAMK------SSTNVAATTAAELPKPFGFAATTTAAGGGST 846
                 ||:::||.....:...|..:..|      ||:|.||:::      |.|..:::::|...|
Human   890 LCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAASSS------FKFGVSSSSSGPSQT 948

  Fly   847 ATNL-------------------------------------FSFGGTATSKAAEPAPASQKN--L 872
            .|:.                                     |.||.::.||..|....|:.:  .
Human   949 LTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFKFGVSSESKPEEVKKDSKNDNFK 1013

  Fly   873 FGL-----NATTTTPFAFGGAAAGAADKSENKDNKPIA-FAFGAGNNSAVANPSGVFSFGGTDKS 931
            |||     |..:.|||.||.:..|..:|.|.......| |:||.|..::...|:... ....:||
Human  1014 FGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTI-VTSENKS 1077

  Fly   932 APPAFGSGTTSVTSATATP---------------TNNTFGFSTT--------------------Q 961
               :|..||....||:..|               |...|.|...                    |
Human  1078 ---SFNLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVLGRTEEKQQ 1139

  Fly   962 KPAT------------------PMFGSGSTQQS-------STPAVAATKP------------FTL 989
            :|.|                  |:|..|:::|:       ||.:.:.|||            |..
Human  1140 EPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQPAKATFAF 1204

  Fly   990 GGGAPTTPSASPASGGFSF--SAVATKNTTAPTAGTNLFGSPASASKP---SFNFG--------- 1040
            |....||.....|...|||  ::.::.:|.|.:||..:|||..|:|.|   :|.||         
Human  1205 GAQTSTTADQGAAKPVFSFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSS 1269

  Fly  1041 --GNTATQ--------------------------------AAAAGSPAGGFSFATTTKKEDSAST 1071
              ||||..                                |::..:...||.|..||....:.|:
Human  1270 AFGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSS 1334

  Fly  1072 NMFGSPNTGVVKPNFS--FSSNNPTPAPTFG-----------GFGAPAAAAPTATSTNQSKPFAF 1123
            .:||   ||...|:.|  |.:|.   .||||           |||:.:::.....:.:|..|..|
Human  1335 FVFG---TGPSAPSASPAFGANQ---TPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTF 1393

  Fly  1124 GASTPAAAPQPPLGGNLFANAVSATQNQTKPSGVFSFGAAKSTAGTTAGNAPFSFGGASAGGIAS 1188
            |  |.:::.|||:.|...:.:...:......|..|.||::.:.         |:|...|..|:  
Human  1394 G--TVSSSSQPPVFGQQPSQSAFGSGTTPNSSSAFQFGSSTTN---------FNFTNNSPSGV-- 1445

  Fly  1189 PPSNQGLNTAKPFSFGGAGGTPAPNVFGSPAPAPPASNPTGGFNFGGVSPAQ---QANAGNMFAP 1250
                        |:||....|||       |.|.|:.  :|||.| ..|||.   .:|..|:|:.
Human  1446 ------------FTFGANSSTPA-------ASAQPSG--SGGFPF-NQSPAAFTVGSNGKNVFSS 1488

  Fly  1251 TPES---RPIRKATRR 1263
            :..|   |.|:.|.||
Human  1489 SGTSFSGRKIKTAVRR 1504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14712NP_650096.1 Nucleoporin_FG2 954..>1180 CDD:292589 76/343 (22%)
NUP153NP_001265138.1 Nup153 113..660 CDD:285770 122/626 (19%)
zf-RanBP 692..718 CDD:279035 2/25 (8%)
RanBP2-type Zn finger 693..712 CDD:275375 0/18 (0%)
zf-RanBP 754..782 CDD:279035 4/27 (15%)
RanBP2-type Zn finger 757..776 CDD:275375 3/18 (17%)
zf-RanBP 824..853 CDD:279035 8/38 (21%)
RanBP2-type Zn finger 828..847 CDD:275375 3/18 (17%)
zf-RanBP 882..911 CDD:279035 5/28 (18%)
RanBP2-type Zn finger 886..905 CDD:275375 4/18 (22%)
Nup_retrotrp_bd 1417..1506 CDD:287557 33/121 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 1 Normalized mean entropy S6703
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23193
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
33.010

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