DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14712 and NUP1

DIOPT Version :9

Sequence 1:NP_650096.1 Gene:CG14712 / 41397 FlyBaseID:FBgn0037924 Length:1266 Species:Drosophila melanogaster
Sequence 2:NP_014741.1 Gene:NUP1 / 854265 SGDID:S000005624 Length:1076 Species:Saccharomyces cerevisiae


Alignment Length:1173 Identity:308/1173 - (26%)
Similarity:428/1173 - (36%) Gaps:327/1173 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 STSLSAASPALQHMNSNGTI-SPTQSPEQVAKRP--------NCSYSNDITSSLSSSCRHSNKRK 329
            :||...:||.::..:.:.|: |...:|.:  |||        |.||:|.:..|......|.||||
Yeast     4 NTSSVMSSPRVEKRSFSSTLKSFFTNPNK--KRPSSKKVFSSNLSYANHLEESDVEDTLHVNKRK 66

  Fly   330 LLDMRERFQHSKNDTLASGGSSPENSP------EN--------VAKIQ-----------RKVDAE 369
            .:....  |||  |:|....:   |:|      ||        :..||           |.:...
Yeast    67 RVSGTS--QHS--DSLTQNNN---NAPIIIYGTENTERPPLLPILPIQRLRLLREKQRVRNMREL 124

  Fly   370 AVSKAMSMPVVTVAAVPASRA-----------ISAPAIQK---AVPQVTEK---------PKL-T 410
            .:.::...|.:|.:.:..|::           .|.|:..|   ...|:..|         |.| :
Yeast   125 GLIQSTEFPSITSSVILGSQSKSDEGGSYLCTSSTPSPIKNGSCTRQLAGKSGEDTNVGLPILKS 189

  Fly   411 LFNARQSQTIAEQPRPDLSSP--EVDAGEYAGIQFVKPKQQNSMLAAKNPSVERTHKTKLAIMLS 473
            |.|....:....|.:..:.|.  |.|..||..||    |:.|..........::|.:.:..|..|
Yeast   190 LKNRSNRKRFHSQSKGTVWSANFEYDLSEYDAIQ----KKDNKDKEGNAGGDQKTSENRNNIKSS 250

  Fly   474 GLKGELYLG-----EPDELDAPAPKSAPAPVTLPTPVKPIII----------APVTTS------- 516
            ...|.|..|     |.::|.|....:     .|..|.|.:::          ||:..|       
Yeast   251 ISNGNLATGPNLTSEIEDLRADINSN-----RLSNPQKNLLLKGPASTVAKTAPIQESFVPNSER 310

  Fly   517 TTTVTSTATISTSAPSKPIILSN---QVIKPADVPN-------TNSTGSVPK--LVLGQPAPPAK 569
            :.|.|....|......:.|:|..   ..||..:.|:       |:|.|:|.|  :.:|:.....|
Yeast   311 SGTPTLKKNIEPKKDKESIVLPTVGFDFIKDNETPSKKTSPKATSSAGAVFKSSVEMGKTDKSTK 375

  Fly   570 TEQTP------PKPIDKVPAAQADIPPK--FELSTKPVTPATSSQPLISFG-------------- 612
            |.:.|      .:..:|..|....:|..  |....|..|..::||| ..||              
Yeast   376 TAEAPTLSFNFSQKANKTKAVDNTVPSTTLFNFGGKSDTVTSASQP-FKFGKTSEKSENHTESDA 439

  Fly   613 TPKSTAAPSFSFG-SATNTTSSTIAN---------ITNTTTSKPIFSFGQTPANGPTVGGLS--- 664
            .|||| ||.|||| ...|.......|         ::..|.:||:|.||:|.....|..|.|   
Yeast   440 PPKST-APIFSFGKQEENGDEGDDENEPKRKRRLPVSEDTNTKPLFDFGKTGDQKETKKGESEKD 503

  Fly   665 ---------GFKTEAPATTSVSTTNPGTQVTSTT------TFG---------VTPPKTTTTVA-- 703
                     |...:....|.:.|......|||..      |||         ..|.:|..|:.  
Yeast   504 ASGKPSFVFGASDKQAEGTPLFTFGKKADVTSNIDSSAQFTFGKAATAKETHTKPSETPATIVKK 568

  Fly   704 PTTTVSLNFGQPMPSFGAADTGVKPMFSFGKSNNLSSGTPTTNGSDAAAAKPAVFSFGGSTTQPA 768
            ||.|    |||.......::...||.|||.||......:|.:|    .||||: |||.|....  
Yeast   569 PTFT----FGQSTSENKISEGSAKPTFSFSKSEEERKSSPISN----EAAKPS-FSFPGKPVD-- 622

  Fly   769 AAAPTPVFGSLSKPLGEGFASPGANKSETTKPSIFGNLDNGLGNAMKSSTNVAATTAAELPKP-F 832
            ..|||.     .|.|...|:        .|:|            |.|.|:.|     :|..|| |
Yeast   623 VQAPTD-----DKTLKPTFS--------FTEP------------AQKDSSVV-----SEPKKPSF 657

  Fly   833 GFAATTTAAGGGSTATNLFSFGGTATSKAAEPAPASQKNLFGLNATTTTPFAFGGAAAGAADKSE 897
            .||::.|     |....|||||   .|.||:..|.|           .|.|:|....|...||..
Yeast   658 TFASSKT-----SQPKPLFSFG---KSDAAKEPPGS-----------NTSFSFTKPPANETDKRP 703

  Fly   898 NKDNKPIAFAFGAG--NNSAVANPSGVFSFGGTDKSAPPAFGSGTTSVTSATATPTNNTFGFS-- 958
            .    |.:|.||..  ||:...:....||||     ||.:..| |.|..:|.....:|.|.|:  
Yeast   704 T----PPSFTFGGSTTNNTTTTSTKPSFSFG-----APESMKS-TASTAAANTEKLSNGFSFTKF 758

  Fly   959 --TTQKPATP-MFGSGSTQQSSTPAVAATKP------------FTLGGGAPTTPSASPASGGFSF 1008
              ..:|..:| .|..||.  ||||.....||            |:.|.......:||..|..|||
Yeast   759 NHNKEKSNSPTSFFDGSA--SSTPIPVLGKPTDATGNTTSKSAFSFGTANTNGTNASANSTSFSF 821

  Fly  1009 SAVATKN---TTAPTAGTNLFGSPASASKPSFNFGGNTATQAAAAGSPAG---GFSFATTTKKED 1067
            :|.||.|   ||:.|:|||:.|        :||.|  ...|:.|:|:..|   .|.|:::.....
Yeast   822 NAPATGNGTTTTSNTSGTNIAG--------TFNVG--KPDQSIASGNTNGAGSAFGFSSSGTAAT 876

  Fly  1068 SASTNM----FGSPNTGVVKPNFSFSSNNPTPAPTFGGFGAPAAAAPTATSTNQSKPFAF----G 1124
            .|::|.    ||:...|.:.|   |:|...:.....|.|..|    |:..:.|.:.|.||    .
Yeast   877 GAASNQSSFNFGNNGAGGLNP---FTSATSSTNANAGLFNKP----PSTNAQNVNVPSAFNFTGN 934

  Fly  1125 ASTPAAAPQPPLGGNLFANAVSA-TQNQTKPSGVFSFGAAKSTAGTTAGNAPFSFGGASAGGI-- 1186
            .|||.......:.||..||.|.| :.||...|...||....|...:|..|  .:|.|.: |||  
Yeast   935 NSTPGGGSVFNMNGNTNANTVFAGSNNQPHQSQTPSFNTNSSFTPSTVPN--INFSGLN-GGITN 996

  Fly  1187 -------------ASPPSNQGLNTAKPFS-FGGAGGTPAPNVFGSPAPAPPASNPTG-----GFN 1232
                         |:..|....|...|.| ||||||.|..: ||.|..||   |..|     |.:
Yeast   997 TATNALRPSDIFGANAASGSNSNVTNPSSIFGGAGGVPTTS-FGQPQSAP---NQMGMGTNNGMS 1057

  Fly  1233 FGG 1235
            .||
Yeast  1058 MGG 1060

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14712NP_650096.1 Nucleoporin_FG2 954..>1180 CDD:292589 75/257 (29%)
NUP1NP_014741.1 PTZ00482 302..>490 CDD:240433 47/189 (25%)
PTZ00108 <458..690 CDD:240271 77/291 (26%)
COG5651 <737..1053 CDD:227938 103/342 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23193
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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