DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14712 and nup124

DIOPT Version :9

Sequence 1:NP_650096.1 Gene:CG14712 / 41397 FlyBaseID:FBgn0037924 Length:1266 Species:Drosophila melanogaster
Sequence 2:NP_593213.1 Gene:nup124 / 2542254 PomBaseID:SPAC30D11.04c Length:1159 Species:Schizosaccharomyces pombe


Alignment Length:1433 Identity:343/1433 - (23%)
Similarity:496/1433 - (34%) Gaps:496/1433 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MSPMADSTRIDASLL---------NNRP-------AASN----FLRGLSPKGSNTSLNGTRTPER 55
            |.|::.:||..:..:         ::||       |.|:    |..||..|.|     ||.:.:|
pombe     1 MPPVSKNTRTSSKTVKKPYDPPQGSSRPFFTVLKRAFSSVLHPFTSGLDEKAS-----GTASKDR 60

  Fly    56 SLMNRSATSSSTITRQKLNLSQVDPRTFADVHSSGLSSRIVALSERS------GLQRSMSASNLY 114
            . ..|:.|.|       |...::.|      |..|.|.||:.:|.||      |::..:. :|.:
pombe    61 K-SGRAGTKS-------LLTPELTP------HYLGKSPRIIRVSNRSHVRTIDGIEEKVH-TNTF 110

  Fly   115 NPLTQPRRAPASPLPYKSRAPTL----------------------------SITQIAPPERSFYS 151
            .|     |.|.....| :.:|||                            |..|||.|:    |
pombe   111 EP-----RKPKQKQDY-TNSPTLFKRHDELSLKSLNSLHPSSALSKKLGSTSQHQIATPK----S 165

  Fly   152 GNTLSSLLRS------NSLVGLVPKTTEQEQLSRENRPILHPPHPQHESEPTRSVLEELKEISRK 210
            ..:|.::|||      |:   |...:.:|::::..| |......|.....|   :|.:.|.::|.
pombe   166 SASLLNILRSLHDEQKNT---LNISSVKQDRITEAN-PTCEKRKPSRSPSP---MLSKKKSVARA 223

  Fly   211 RINTEDTQQAQDYTKRSCQQNVDFVDFVAHHRQQQKLRNLQQQQN-------------QSFKRQR 262
            ..|           :.|.:||..|....:|    :.|.:::.::|             :|.:|:|
pombe   224 SEN-----------EPSAKQNKSFSGNDSH----KSLTDIRDKENGETEVSAKNHVPHRSSRRRR 273

  Fly   263 ELTVSVPLRHHS-TSLSAASPALQHMNSNGTISPTQSPEQVAKRPNCSY--SNDITSSLSSSCRH 324
            .....:|:.:.: ..:....|.|    .|..:....:|      .|..:  ..||...||:..  
pombe   274 RHQRLIPIIYETLEQMDLRKPVL----VNAEVQTDSNP------GNTMFIDKQDIYHRLSTPT-- 326

  Fly   325 SNKRKLL-------------DMRERFQHSKNDTLASGGSSPENSPENVAKIQRKVDAEAVSKAMS 376
            |.||:.|             |:.|.|. .::|...:  :.|:.:|:: .:|...:.|........
pombe   327 SRKRQTLEKGHIKAFSAVDEDLDEIFA-CEDDVHYT--ALPKQNPKS-ERILEPIIASPKDNTSD 387

  Fly   377 MPVVTVAAVPASRAISAPAIQKAVPQVTEKP--------KLTLFNARQSQTIAEQPRPDLSSPEV 433
            ..::|.         |||..::....:|.||        .|||.||..::|...||    .|.:.
pombe   388 KGLLTK---------SAPTFEELQASITPKPVKTSPNDTALTLANAEDNKTFEHQP----LSKDT 439

  Fly   434 DAGEYAGIQFVKPKQQNSMLAAKNPSVERTHKTKLAIMLSGLKGELYLGEPDELDAPAPKSAPAP 498
            :|          ||.|.|    .:|:.|.|.:                  ..|::.|:|......
pombe   440 EA----------PKSQFS----SSPTKESTTR------------------KSEVEPPSPSKEIKS 472

  Fly   499 VTLPTPVKPIIIAPVTTSTTTVTSTATISTSAPSKPIILSNQVIKP---ADVPNTNSTGSVPKLV 560
            .....|  .....|.|.:||             .|.:.:.....||   ||| .||      :|.
pombe   473 SHFSVP--EFKFEPKTEATT-------------DKKLNVPKFEFKPTATADV-QTN------RLK 515

  Fly   561 LGQPAP------PAKTEQTPPKPIDKVPAAQADIPPKFELSTK----PVTPATSSQPLISFG--T 613
            ..:|.|      |:||::||....:| |:..:.:.||.|.:.|    |..||::|.  .|||  .
pombe   516 ENEPKPTFFAQLPSKTQETPSITENK-PSFFSQLSPKREETEKKDNAPSAPASTSG--FSFGGFA 577

  Fly   614 PKS------TAAPSFSF-----GSATNTTSSTI------------ANITN--------------- 640
            ||:      |.||:|:|     .|..:||..|:            :||.|               
pombe   578 PKTLEEKEETKAPTFNFSLNNASSTQDTTKPTLQFNFGSSFGKPTSNIFNDKKTSENGLASSTVA 642

  Fly   641 ------TTTSKPIFSFGQTPANGPTVGGLSGFKTEAPATTSVS-------TTNPGTQVTSTTTFG 692
                  ...|||...||.|..:.|....|:....|.|.|.|.|       ..|......::|.|.
pombe   643 SESKPSAPESKPSSGFGNTAGSSPFSFNLTKESKEVPPTNSFSFAKKGKDEANDSLSAKASTPFS 707

  Fly   693 VTPPKT--TTTVAPTTTVSLNFGQPMPSFGAADTGVKPMFSFG----KSNNLSSGTPTTNGSDAA 751
            ...|.|  .||.||  ..|.||.:|...   |.|.:.|..:|.    |........|.| |..|:
pombe   708 FAKPNTENVTTTAP--QFSFNFTKPNTD---AKTNLLPEKTFNEEAVKQKETEKEVPPT-GPKAS 766

  Fly   752 AAKPAVFSFGGSTTQPAAAAPTPVFGSLSKPLGEGFASPGANKSETTKPSIFGNLDNGL----GN 812
            ..|.:|.|..        |.|:..|         .|.||.|..||.|..:   |:.|..    ||
pombe   767 EIKDSVSSNN--------AVPSSTF---------NFVSPFAAVSEKTNEN---NIPNDTTKTNGN 811

  Fly   813 AMKSSTNVAATTAAELPKPFGFAATTTAAGGGSTATNLFSFGGTATSKAAEPAPASQKNLFGLNA 877
            |.|.:..   .|....|..|.|.:||..|...::.:|          :..:|...:.....|:  
pombe   812 ATKRTLE---QTEDAKPFAFSFGSTTEQANKKASTSN----------ETTKPQLDTSSKTDGV-- 861

  Fly   878 TTTTPFAFGGAAAGAADKSENKDNKPIAFAFGAGNNSAVANPSGVFSFGGTDKSAPPAFGSGTTS 942
            |...||:|..|.......:...|.|..|        |.:..||..||||  :.|...|..:...|
pombe   862 TANAPFSFASAFNAPKPSTNTADGKDSA--------SNLTTPSPAFSFG--NNSGVKASSNNNPS 916

  Fly   943 VTSATATPTNNTFGFSTTQKPATPMFGSG---STQQSSTPAVAATKPFTLGGGAPTTPSASPASG 1004
            ..|:||     .|.|.|:.|||. .|||.   :|.:.:.||.:|:.|      ||||       .
pombe   917 TNSSTA-----PFSFGTSNKPAF-SFGSATSKTTSEGTAPAASASAP------APTT-------S 962

  Fly  1005 GFSFSAVATKNTTAPTAGTNLFGSPASASKPSFNFGGNTATQAAAAG--SPAGGFSFATTTKKED 1067
            .|||                      .||..|.|...|| ..|..||  :||.||          
pombe   963 AFSF----------------------GASNSSMNKEENT-PMAKDAGDTAPASGF---------- 994

  Fly  1068 SASTNMFGSPNTGVVKPNFSFSSNN-PTPAPTFGGFGAPAAAAPTATST-NQSKPFAFGASTPAA 1130
                           |..|||.:|| |.||..||            ||| ..|..||||      
pombe   995 ---------------KSGFSFGANNSPQPASMFG------------TSTPAPSSAFAFG------ 1026

  Fly  1131 APQPPLGGNLFANAVSATQNQTKPSGVFSFGAAKSTAGTTAGNAPFSFGGASAGGIASPPSNQGL 1195
                             .|:.|.|:....||...:||.....:..|:|          .|||.|.
pombe  1027 -----------------NQSGTNPAAPAGFGGITNTATNNPPSTGFTF----------TPSNAGS 1064

  Fly  1196 NTAKPFSFGGAGGTPAPN----------VFGSPAPAPPASN-PTGGFNFGGVSPAQQANAGNMFA 1249
            ..|..|   |||.||.|:          .|||..|:.|||| |:.||:||..:|: ..||....:
pombe  1065 TAAPMF---GAGNTPNPSGSINNASQAFAFGSGEPSNPASNPPSTGFSFGAATPS-AFNASASQS 1125

  Fly  1250 PTP 1252
            |.|
pombe  1126 PAP 1128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14712NP_650096.1 Nucleoporin_FG2 954..>1180 CDD:292589 62/232 (27%)
nup124NP_593213.1 Nup_retrotrp_bd 1072..1158 CDD:287557 23/58 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 129 1.000 Inparanoid score I1436
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23193
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.150

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