DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14712 and nup153

DIOPT Version :9

Sequence 1:NP_650096.1 Gene:CG14712 / 41397 FlyBaseID:FBgn0037924 Length:1266 Species:Drosophila melanogaster
Sequence 2:NP_001265678.1 Gene:nup153 / 100492369 XenbaseID:XB-GENE-6453061 Length:1547 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14712NP_650096.1 Nucleoporin_FG2 954..>1180 CDD:292589
nup153NP_001265678.1 Nup153 120..572 CDD:285770
ZnF_RBZ 606..629 CDD:197784
RanBP2-type Zn finger 608..627 CDD:275375
zf-RanBP 669..698 CDD:279035
RanBP2-type Zn finger 673..692 CDD:275375
zf-RanBP 736..765 CDD:279035
RanBP2-type Zn finger 740..759 CDD:275375
zf-RanBP 788..817 CDD:279035
RanBP2-type Zn finger 792..811 CDD:275375
zf-RanBP 849..878 CDD:279035
RanBP2-type Zn finger 853..872 CDD:275375
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23193
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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