DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6813 and ZNF350

DIOPT Version :9

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_016882583.1 Gene:ZNF350 / 59348 HGNCID:16656 Length:574 Species:Homo sapiens


Alignment Length:334 Identity:82/334 - (24%)
Similarity:125/334 - (37%) Gaps:66/334 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CSRSDAPI-------DLFGPGNGHLVRQIHSITGVELSCKKEISG---QMCTTCLDNLQAAIKF- 62
            ||:|...:       ||.|......:..::...|.|:....|.:|   .......:.|..|||| 
Human   157 CSKSQFLLGQNHDIFDLRGKSLKSNLTLVNQSKGYEIKNSVEFTGNGDSFLHANHERLHTAIKFP 221

  Fly    63 --------RQRCIIAEKQNLERIE----CDSKDCSTDPIIYEDIDDNQIESELDESILCPEVKDL 115
                    :.:.|..:.|...::|    |  .:|....|....:.|:|:....::...|      
Human   222 ASQKLISTKSQFISPKHQKTRKLEKHHVC--SECGKAFIKKSWLTDHQVMHTGEKPHRC------ 278

  Fly   116 PMPSAEKV-SAPTSLNHQKSIGGGTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCER 179
              ...||. |....|...:....|..||.||:||:....||....|...|||.|.:.|  ..|.:
Human   279 --SLCEKAFSRKFMLTEHQRTHTGEKPYECPECGKAFLKKSRLNIHQKTHTGEKPYIC--SECGK 339

  Fly   180 SFATRKELTSHTRIHTGEQPYVCVYCPRRF----------------------------SSSGARQ 216
            .|..:..|..|.||||||:||:|..|.:.|                            |......
Human   340 GFIQKGNLIVHQRIHTGEKPYICNECGKGFIQKTCLIAHQRFHTGKTPFVCSECGKSCSQKSGLI 404

  Fly   217 EHHRRHRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKHFKRISHLMTHLSSNIHK 281
            :|.|.|..|:.:||..|.|:|.:...|..|:..|...|.:.|..|.|.|..:|.|:.|  ..||.
Human   405 KHQRIHTGEKPFECSECGKAFSTKQKLIVHQRTHTGERPYGCNECGKAFAYMSCLVKH--KRIHT 467

  Fly   282 RKEEKLTEL 290
            |::::..::
Human   468 REKQEAAKV 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071 17/85 (20%)
C2H2 Zn finger 144..164 CDD:275368 7/19 (37%)
C2H2 Zn finger 172..194 CDD:275368 6/21 (29%)
zf-H2C2_2 186..211 CDD:290200 13/52 (25%)
UFD2 <256..>294 CDD:227443 10/35 (29%)
C2H2 Zn finger 258..280 CDD:275368 7/21 (33%)
ZNF350XP_016882583.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4733
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.