DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and si:ch211-241e1.5

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001119897.1 Gene:si:ch211-241e1.5 / 567583 ZFINID:ZDB-GENE-030131-6298 Length:542 Species:Danio rerio


Alignment Length:284 Identity:78/284 - (27%)
Similarity:107/284 - (37%) Gaps:56/284 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 HSITGVELSCKKEISGQMCTTCLDNLQAAIKFRQRCIIAEKQNLERIECDSKDCSTDPIIYEDID 95
            |..|.:|  |.||       .|.|     :.....|.:.:::..|:|:|..        :.|:..
Zfish     9 HKPTNME--CVKE-------ECED-----VHIPDPCTVKDEETEEQIDCTP--------VKEETQ 51

  Fly    96 DNQIESELDESILCPEVKDLPMPSAE------------------------KVSAPTSLNHQKSIG 136
            |.:.|.|.:|.::.||.....:...|                        ..|....|.....|.
Zfish    52 DVKDEEEDEEQLIDPESTQTSLSCTETHNKRFKRRRLQTKPGFKCSQCGKSFSREGHLESHMRIH 116

  Fly   137 GGTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQPYV 201
            .|..|:.|..||:..|.|.|...|...|:|...|.|  ..|.:||..:..|..|.||||||.|:.
Zfish   117 TGETPFTCKQCGKRFNQKGNLYSHMKIHSGESPFRC--QQCGKSFNQKGNLKLHMRIHTGECPFT 179

  Fly   202 CVYCPRRFSSSGARQEHHRRHRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKHFK 266
            |.:|.:.||..|....|.:.|..||.:.|..|.|||..:..|:.|..:|   ....|.||.:|..
Zfish   180 CKHCDKSFSLKGNLMNHMKTHSGERSFACRRCGKSFTQNKTLKSHMKVH---EGDQCGVCSRHRS 241

  Fly   267 RISHLMTHLSSNIHKR--KEEKLT 288
            ..|...   .||.|.|  .|||.|
Zfish   242 SCSDAK---CSNRHLRTKHEEKQT 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 9/44 (20%)
C2H2 Zn finger 144..164 CDD:275368 7/19 (37%)
C2H2 Zn finger 172..194 CDD:275368 7/21 (33%)
UFD2 <256..>294 CDD:227443 13/35 (37%)
C2H2 Zn finger 258..280 CDD:275368 7/21 (33%)
si:ch211-241e1.5NP_001119897.1 COG5048 <94..252 CDD:227381 52/165 (32%)
C2H2 Zn finger 96..116 CDD:275368 2/19 (11%)
C2H2 Zn finger 124..144 CDD:275368 7/19 (37%)
C2H2 Zn finger 152..172 CDD:275368 7/21 (33%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
C2H2 Zn finger 287..307 CDD:275368
SFP1 <309..398 CDD:227516
C2H2 Zn finger 315..335 CDD:275368
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368
C2H2 Zn finger 419..436 CDD:275368
C2H2 Zn finger 447..467 CDD:275368
C2H2 Zn finger 519..539 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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