DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and ZNF562

DIOPT Version :9

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001123503.1 Gene:ZNF562 / 54811 HGNCID:25950 Length:426 Species:Homo sapiens


Alignment Length:145 Identity:52/145 - (35%)
Similarity:70/145 - (48%) Gaps:2/145 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 GTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQPYVC 202
            |...:.|.:|||...|.|:|..|...|||||...|.  .|.::|.....||.|.|.|||.:||.|
Human   284 GEKSFECKECGRSFRNSSSFNVHIQIHTGIKPHKCT--ECGKAFTRSTHLTQHVRTHTGIKPYEC 346

  Fly   203 VYCPRRFSSSGARQEHHRRHRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKHFKR 267
            ..|.:.|:.......|.|.|..|:.|:|..|.|:|..|..|.:|:.||...:.:.|..|.|.|..
Human   347 KECGQAFTQYTGLAIHIRNHTGEKPYQCKECGKAFNRSSTLTQHRRIHTGEKPYECVECGKTFIT 411

  Fly   268 ISHLMTHLSSNIHKR 282
            .||...||.::..:|
Human   412 SSHRSKHLKTHSGER 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071
C2H2 Zn finger 144..164 CDD:275368 8/19 (42%)
C2H2 Zn finger 172..194 CDD:275368 7/21 (33%)
zf-H2C2_2 186..211 CDD:290200 12/24 (50%)
UFD2 <256..>294 CDD:227443 9/27 (33%)
C2H2 Zn finger 258..280 CDD:275368 8/21 (38%)
ZNF562NP_001123503.1 KRAB 40..81 CDD:307490
COG5048 <117..308 CDD:227381 9/23 (39%)
C2H2 Zn finger 181..198 CDD:275370
C2H2 Zn finger 206..226 CDD:275368
COG5048 <258..420 CDD:227381 50/137 (36%)
C2H2 Zn finger 263..282 CDD:275368
C2H2 Zn finger 290..310 CDD:275368 8/19 (42%)
C2H2 Zn finger 318..338 CDD:275368 7/21 (33%)
C2H2 Zn finger 346..366 CDD:275368 5/19 (26%)
C2H2 Zn finger 374..394 CDD:275368 7/19 (37%)
C2H2 Zn finger 402..422 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4733
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

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