DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and ZIPIC

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster


Alignment Length:239 Identity:65/239 - (27%)
Similarity:98/239 - (41%) Gaps:46/239 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 DNLQAAIKFRQRCIIAEKQNLERIECDSKDCSTDPIIYEDIDDNQIESELDESILCPEVKDLPMP 118
            ::|..||::    ||::.::.|:                   ||:...|...:|.||.       
  Fly   227 EHLDGAIEY----IISDGEDQEQ-------------------DNESSGEYTVNIQCPS------- 261

  Fly   119 SAEKVSAPTSLN-HQK--SIGGGTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERS 180
            ..||.|:..:.| |.|  ...|    |||..||:.:.:.|.|..|...|..:|.|.|..  |...
  Fly   262 CPEKFSSRRAYNVHTKREHFPG----YVCDQCGKTLQSYSGFIGHLQNHEPVKQFACPV--CPER 320

  Fly   181 FATRKELTSHTRIHTGEQPYVCVYCPRRFSSSGARQEHHRRHRNE-RRYECDTCKKSFVSSGCLR 244
            |:.:..|..|...|:||.||.|..|.:||....|..:|...|.:| :|.||..|.....:...|.
  Fly   321 FSRKFRLKHHMAWHSGETPYQCDVCSKRFVHKVALYKHKMIHDSETKRLECQVCGFKTRTKAHLE 385

  Fly   245 KHKMIHVDARNHYCYVCQKHFKRISHLMTHL------SSNIHKR 282
            :|...|...:...|.||.|.|.::.::..||      .:|.|:|
  Fly   386 RHMRSHTGDKPFACPVCNKRFSQMYNMKAHLREHESPGTNRHRR 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 5/21 (24%)
C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
C2H2 Zn finger 172..194 CDD:275368 5/21 (24%)
UFD2 <256..>294 CDD:227443 10/33 (30%)
C2H2 Zn finger 258..280 CDD:275368 8/27 (30%)
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 6/19 (32%)
C2H2 Zn finger 314..334 CDD:275368 5/21 (24%)
SFP1 <336..419 CDD:227516 26/82 (32%)
C2H2 Zn finger 342..391 CDD:275368 14/48 (29%)
zf-H2C2_2 383..408 CDD:463886 8/24 (33%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
C2H2 Zn finger 432..449 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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