DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and wdn

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster


Alignment Length:137 Identity:50/137 - (36%)
Similarity:69/137 - (50%) Gaps:5/137 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 CPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQPYVCVYCPRR 208
            |||||:.:...|.:. |...|:..|.:.|..  |.:.|..:..||.|.|||:.|:||.|..|.:|
  Fly   333 CPDCGKCLKLGSMWM-HRKIHSDNKKYQCDI--CGQKFVQKINLTHHARIHSSEKPYECPECQKR 394

  Fly   209 FSSSGARQEHHRRHRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKHFKRISHLMT 273
            |......|.|.:.|...|.|.|:.|.|.:.:..||:.|.::|::.|...|.||.|.|...|.|..
  Fly   395 FQERSHLQRHQKYHAQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFACTVCDKSFISNSKLKQ 459

  Fly   274 HLSSNIH 280
            |  ||||
  Fly   460 H--SNIH 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262
C2H2 Zn finger 144..164 CDD:275368 7/19 (37%)
C2H2 Zn finger 172..194 CDD:275368 7/21 (33%)
UFD2 <256..>294 CDD:227443 12/25 (48%)
C2H2 Zn finger 258..280 CDD:275368 10/21 (48%)
wdnNP_476900.1 zf-C2HE <279..321 CDD:465082
C2H2 Zn finger 301..321 CDD:275368
C2H2 Zn finger 333..352 CDD:275368 7/19 (37%)
zf-C2H2 358..380 CDD:395048 7/23 (30%)
C2H2 Zn finger 360..380 CDD:275368 7/21 (33%)
zf-H2C2_2 376..395 CDD:463886 9/18 (50%)
zf-C2H2 386..408 CDD:395048 7/21 (33%)
C2H2 Zn finger 388..436 CDD:275368 15/47 (32%)
zf-H2C2_2 400..425 CDD:463886 8/24 (33%)
C2H2 Zn finger 416..433 CDD:275368 5/16 (31%)
SUF4-like 440..>507 CDD:411020 13/27 (48%)
C2H2 Zn finger 444..465 CDD:411020 12/23 (52%)
C2H2 Zn finger 444..464 CDD:275368 10/21 (48%)
zf-H2C2_2 457..481 CDD:463886 6/10 (60%)
C2H2 Zn finger 472..493 CDD:411020
C2H2 Zn finger 472..493 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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