DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and CG4730

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_651413.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster


Alignment Length:364 Identity:86/364 - (23%)
Similarity:133/364 - (36%) Gaps:100/364 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LNCRICSR-SDAPIDLFGPGNGHLVRQIHSITGVELS---------------------------- 39
            ||..|..| ::||:.|.    .|.|....|.|.:|||                            
  Fly    12 LNFTIARRTAEAPVKLV----SHEVSLSDSTTSLELSNCCRLCLEEPYPNQMLDMTVIYDQEAAL 72

  Fly    40 --------CKKEISGQ--------MCTTCLDNLQAAIKFRQRCIIAEKQNLERIECDSKDCSTDP 88
                    |.||...|        :|..|...|:.|..|.::..||.:|..|.......:...: 
  Fly    73 SYYDCYEICTKEDLRQNPKNEPRTLCKRCAVELKWAYDFHKKMAIANQQLREIFVATEANTEQE- 136

  Fly    89 IIYEDIDDNQIESELDESILCPEV---KDLPMPSAEKVSAPTSLNHQKSIGGGTGPYVCPDCGRI 150
               :|::|.:.|::::|..|..|:   ::.|:.|.|.: .|.:.:        ||...|..|.:.
  Fly   137 ---DDVEDEENEADMNEEFLMEEIEEKQETPIDSLEDI-VPRNRH--------TGKSNCKFCHKE 189

  Fly   151 INNKSNFQEHTLRHTGIK-NFHC-----VFL---------------------NCERSFATRKELT 188
            ..|.|...:|.:.|...: ||.|     |:|                     .|.:.||..|.|.
  Fly   190 FRNHSRMAKHQMIHLANRPNFRCSQCDRVYLTKQALKVHVDSKHRQSGVHCDTCGKVFAIAKALE 254

  Fly   189 SHTRIHTGEQPYVCVYCPRRFSSSGARQEHHRRHRNERRYECD--TCKKSFVSSGCLRKHKMIHV 251
            .|.|.|..:.||.|..|.|||:.......|.:...:..|:.|:  .|:|||.||..||.|:..|.
  Fly   255 IHKRYHNRDFPYSCDLCDRRFAQRSHLTVHQQVKHSGSRFICEFPGCQKSFTSSSSLRNHECTHT 319

  Fly   252 DARNHYCYVCQKHFKRISHLMTHLSSNIHKRKEEKLTEL 290
             |....|..|.:.:...:.|..||     :||...:.::
  Fly   320 -AMPFECAHCHQSYPARNKLRMHL-----ERKHNMVVQM 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 25/115 (22%)
C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
C2H2 Zn finger 172..194 CDD:275368 10/47 (21%)
UFD2 <256..>294 CDD:227443 7/35 (20%)
C2H2 Zn finger 258..280 CDD:275368 5/21 (24%)
CG4730NP_651413.1 zf-AD 46..124 CDD:462262 12/77 (16%)
C2H2 Zn finger 183..203 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..232 CDD:275368 3/19 (16%)
C2H2 Zn finger 240..260 CDD:275368 7/19 (37%)
C2H2 Zn finger 268..289 CDD:275368 6/20 (30%)
C2H2 Zn finger 296..318 CDD:275368 10/21 (48%)
C2H2 Zn finger 325..346 CDD:275368 6/25 (24%)

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