DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and CG4854

DIOPT Version :9

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster


Alignment Length:315 Identity:95/315 - (30%)
Similarity:132/315 - (41%) Gaps:36/315 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RILNCRICSRSDAPIDLFGPGNGHLVRQIHSITGVELSCKKEISGQMCTTCLDNLQAAIKFRQRC 66
            |.|.||||........|. |.......:|...||||||...:...::||:|...|:||:|.|..|
  Fly     8 RDLKCRICLVQPKDESLM-PTEPDFPDKIKRCTGVELSESPDWPNRICTSCALLLRAALKLRSLC 71

  Fly    67 IIAEK----QNLERI-------------ECDSKDCSTD-------PIIYEDIDDNQIESELDESI 107
            ...||    |.|:.|             :.:|:|.|.:       .:.||.:|...:..|..|.:
  Fly    72 QQTEKDLKEQKLQEINIEIVHDEQETKKKTESRDLSKNEATGSDSELEYEYLDSYDVTLESSEDV 136

  Fly   108 LCPE---VKDLPMPSAEKVS----APTSLNHQKSIGGGTGPYVCPDCGRIINNKSNFQEHTLRHT 165
            .|..   |...|..||.:.|    :|..:..:....|....:.|..|..:.:.:.....|...|:
  Fly   137 ACSADELVSIEPAISAPEESVYSLSPKPVTFEDEDSGQAASFTCNICNNVYSERVKLTNHMKVHS 201

  Fly   166 GIKNFHCVFLNCERSFATRKELTSHTRIHTGEQPYVCVYCPRRFSSSGARQEHHRRHRNERRYEC 230
            ..|...|..  |.:.|....:|..|...|||.:||.|.||..||:....|.:|.|.|.|||.|:|
  Fly   202 AKKPHECEI--CHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQRIHTNERPYKC 264

  Fly   231 DTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKHFKRISHLMTHLSSNIHKRKEE 285
            :.|.:||..|..||.|...|...|...|..|||.|.::.|..:|..|  |||.:|
  Fly   265 EFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKS--HKRTKE 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071 26/73 (36%)
C2H2 Zn finger 144..164 CDD:275368 3/19 (16%)
C2H2 Zn finger 172..194 CDD:275368 5/21 (24%)
zf-H2C2_2 186..211 CDD:290200 12/24 (50%)
UFD2 <256..>294 CDD:227443 12/30 (40%)
C2H2 Zn finger 258..280 CDD:275368 8/21 (38%)
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 15/45 (33%)
C2H2 Zn finger 180..200 CDD:275368 3/19 (16%)
zf-H2C2_2 193..217 CDD:290200 6/25 (24%)
COG5048 201..>258 CDD:227381 20/58 (34%)
C2H2 Zn finger 208..228 CDD:275368 5/21 (24%)
zf-H2C2_2 221..244 CDD:290200 11/22 (50%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 251..273 CDD:290200 11/21 (52%)
C2H2 Zn finger 264..284 CDD:275368 8/19 (42%)
zf-H2C2_2 277..301 CDD:290200 10/23 (43%)
C2H2 Zn finger 292..312 CDD:275368 8/21 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26482
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.970

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