DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and CG17801

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster


Alignment Length:350 Identity:87/350 - (24%)
Similarity:142/350 - (40%) Gaps:88/350 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LVRQIHSITGVELSCKKEISGQMCTTCLDNLQAAIKFRQR-------CIIAEKQNLE-------- 75
            ::.:|..:||:.|...:.....:|.:||::|..:||.::|       ..:..:..|:        
  Fly    30 VLAKIKDLTGIWLEQNERQPRHICPSCLNDLNTSIKLKKRIQRVHNEATLRRESGLDEDLESTVS 94

  Fly    76 --RIECDSKDCSTD----------------------------------------PIIY------- 91
              ..|.||.|..::                                        |:|:       
  Fly    95 DIEPEGDSSDLESEESYDSENYPFDKKAEESDIDLNLAHEDRRNEPHNPYDSETPLIFKHKNPLI 159

  Fly    92 -------EDIDDN------------QIESELDESILCPEVKDL-PMPSAEKVSAPTSLNHQKSIG 136
                   |::.:.            ||.::|......|.:|.: |:..|.:..|..::...|...
  Fly   160 ETPSFANENLPNKVDAKSPKKGNFIQIGTDLRLLTTYPSIKVVKPLALAPEDVAAENVPPAKRTA 224

  Fly   137 GGTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRI-HTGEQPY 200
            ......|||.|||:.....|.:.|.:||||.|||.|.|  |::.|.|:.....|.|: |.||||:
  Fly   225 RKMQSLVCPKCGRVFKTPYNLKTHMVRHTGEKNFPCTF--CDKRFVTKYLARLHERVRHMGEQPF 287

  Fly   201 VCVYCPRRFSSSGARQEHHR-RHRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKH 264
            .|.:|...|.:|.|:..|.| ||..:.||:||.|.|.|.:..||.|||.:|...:...|.:||.:
  Fly   288 ECNFCSATFFTSTAKSSHERIRHIRDLRYQCDQCTKRFNTKTCLNKHKFLHSGLKPFDCVICQIN 352

  Fly   265 FKRISHLMTHLSSNIHKRKEEKLTE 289
            |.|.:.|.:|..|..|:::...:.|
  Fly   353 FARKATLRSHFDSVAHQKRASAILE 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 12/66 (18%)
C2H2 Zn finger 144..164 CDD:275368 7/19 (37%)
C2H2 Zn finger 172..194 CDD:275368 7/22 (32%)
UFD2 <256..>294 CDD:227443 9/33 (27%)
C2H2 Zn finger 258..280 CDD:275368 8/21 (38%)
CG17801NP_650660.2 zf-AD 9..76 CDD:462262 11/45 (24%)
zf-C2H2 231..252 CDD:395048 8/20 (40%)
C2H2 Zn finger 232..252 CDD:275368 7/19 (37%)
zf-H2C2_2 244..269 CDD:463886 13/26 (50%)
C2H2 Zn finger 260..281 CDD:275368 7/22 (32%)
C2H2 Zn finger 289..308 CDD:275368 6/18 (33%)
C2H2 Zn finger 318..338 CDD:275368 10/19 (53%)
C2H2 Zn finger 346..362 CDD:275368 6/15 (40%)

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