DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and Nnk

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_650659.2 Gene:Nnk / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster


Alignment Length:423 Identity:105/423 - (24%)
Similarity:161/423 - (38%) Gaps:148/423 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRICS---RSDAPIDLFGPGNGHLVRQIHSITGVELSCKKEISGQMCTTCLDNLQAAIKFRQRCI 67
            ||:|.   .:..|:::|.. |..:||||..:||:.|:...::...||:.||.:|::||.|||.||
  Fly     5 CRLCGDLIYTQNPVNIFDE-NSKMVRQIALVTGLWLTDHSKMPRNMCSCCLLSLKSAIAFRQACI 68

  Fly    68 IAEKQ-NLERIECDSKD--CSTDP------------------IIYE-DIDDN------------- 97
            ....: .::|...::||  |..||                  ::|| ...||             
  Fly    69 KTNNRLTIQRRSVEAKDDGCWADPLSDAHEGLKINDAEVEQEVLYEVSYADNEGLEEDHDLYKKE 133

  Fly    98 QIESELDES-----ILC--------------PEVKDL---------------------------- 115
            :.|||::|:     |.|              .|.:|:                            
  Fly   134 EEESEVNENKEFEDIACEIPFSKEDDEQEQQQEYEDMVDKKTGHDDGEESQECEESQPDEEESQQ 198

  Fly   116 ----------------------------PMPSAEKVSAPTSLNHQK----SIGGGTGP------- 141
                                        .|...|..|..::|:..|    .....:.|       
  Fly   199 NEEDEEESQEDDDELWQNEDGDSDTDADSMSDIEATSRQSALDEDKKPRRKYTKRSSPKNDDTDF 263

  Fly   142 ----------------YVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSH 190
                            ::|..||:...:|.||..|.|||:|:|.|.|.  .|.:....|..|..|
  Fly   264 LKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGVKPFECP--ECGQKEFNRYILNIH 326

  Fly   191 TRI-HTGEQPYVCVYCPRRFSSSGARQEHHRR-HRNE---RRYECDTCKKSFVSSGCLRKHKMIH 250
            .|: |.||:||.|.:|..||..|..|..|..| |||:   :.::|:.|.|.:.|:....||:::|
  Fly   327 IRVKHRGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNYCDKRYESNYQRAKHEVVH 391

  Fly   251 VDARNHYCYVCQKHFKRISHLMTHLSSNIHKRK 283
            ...||.:|.||:..|.|.|:|.||..|..|:.|
  Fly   392 TGERNFHCEVCKVSFTRNSNLKTHYRSRQHQNK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 25/73 (34%)
C2H2 Zn finger 144..164 CDD:275368 8/19 (42%)
C2H2 Zn finger 172..194 CDD:275368 6/22 (27%)
UFD2 <256..>294 CDD:227443 12/28 (43%)
C2H2 Zn finger 258..280 CDD:275368 10/21 (48%)
NnkNP_650659.2 zf-AD 4..74 CDD:214871 25/69 (36%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
C2H2 Zn finger 310..331 CDD:275368 6/22 (27%)
C2H2 Zn finger 339..360 CDD:275368 8/20 (40%)
C2H2 Zn finger 371..388 CDD:275370 5/16 (31%)
zf-met 397..421 CDD:463736 10/23 (43%)
C2H2 Zn finger 399..417 CDD:275368 9/17 (53%)

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