DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and D19B

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster


Alignment Length:269 Identity:66/269 - (24%)
Similarity:102/269 - (37%) Gaps:41/269 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 CTTCLDNLQAAIKFRQRCIIAEKQNLERIECDSKDC----------------------STDPIIY 91
            |..|....:.||::.:.  :....:|...:|..:.|                      :..|..|
  Fly   255 CHICHQKFKKAIRYEEH--MKHHNDLLPFQCTVESCRKGFTTANGLRVHVEHAHTETSAMHPCTY 317

  Fly    92 EDIDDN-------QIESELDESILCPEVKDLPMPSAEKV-SAPTSL-NHQKSIGGGTGPYVCPDC 147
            |..:.:       ....:....:..|: :|.|....||| ..||:| .|.....|...|:.|..|
  Fly   318 EGCNKSFARPVLLSFHMKRVHKVDTPQ-RDFPCTECEKVFRCPTALKKHMYKHTGEELPFACEIC 381

  Fly   148 GRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQPYVCVYCPRRFSSS 212
            |:.....|..::|.|||.||||..|.:  |.....||:|...|...||.|:.|.|..|.....:.
  Fly   382 GKRFPINSVLRDHLLRHAGIKNHVCPY--CGVGKTTRQEWNKHILTHTKEKKYECRQCDHASHNK 444

  Fly   213 GARQEHHR-RHRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKHF---KRIS-HLM 272
            .|...|.: .|...:.:.|..|.|:|..|...:.|:..|...:...|.:|.|.|   |.:: ||.
  Fly   445 QALANHVKVVHEKRKDFACQYCGKTFGKSHACKIHERSHTGEKCCECKICGKVFLFEKGLTKHLK 509

  Fly   273 THLSSNIHK 281
            ||...::.|
  Fly   510 THEKRDLPK 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 5/26 (19%)
C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
C2H2 Zn finger 172..194 CDD:275368 6/21 (29%)
UFD2 <256..>294 CDD:227443 10/30 (33%)
C2H2 Zn finger 258..280 CDD:275368 9/25 (36%)
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 4/21 (19%)
SFP1 <266..365 CDD:227516 16/101 (16%)
C2H2 Zn finger 283..335 CDD:275368 5/51 (10%)
C2H2 Zn finger 318..338 CDD:275368 1/19 (5%)
COG5048 <347..512 CDD:227381 52/166 (31%)
C2H2 Zn finger 349..369 CDD:275368 7/19 (37%)
C2H2 Zn finger 378..398 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..426 CDD:275368 6/21 (29%)
C2H2 Zn finger 434..455 CDD:275368 4/20 (20%)
C2H2 Zn finger 463..483 CDD:275368 6/19 (32%)
C2H2 Zn finger 491..511 CDD:275368 7/19 (37%)
C2H2 Zn finger 586..607 CDD:275368
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:463886
C2H2 Zn finger 643..663 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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