DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and Blimp-1

DIOPT Version :9

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001261442.1 Gene:Blimp-1 / 38638 FlyBaseID:FBgn0035625 Length:1216 Species:Drosophila melanogaster


Alignment Length:199 Identity:61/199 - (30%)
Similarity:85/199 - (42%) Gaps:20/199 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 SILCPEVKDLPMPSAEKVSAPTSLNHQKSIG-----------GGTGPYVCPDCGRIINNKSNFQE 159
            |.|.|:....|     :..:|.|.|...|.|           .|...|.|..|.:.....||.:.
  Fly   848 SSLSPDGNSCP-----RSGSPLSPNSLASRGYRSLPYPLKKKDGKMHYECNVCCKTFGQLSNLKV 907

  Fly   160 HTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQPYVCVYCPRRFSSSGARQEHHRRHRN 224
            |...|:|.:.|.|..  |.:||.....|..|..:||||:|:.|..|.:||||:...:.|.|.|..
  Fly   908 HLRTHSGERPFKCNV--CTKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSG 970

  Fly   225 ERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKHFKRISHLMTHLSSNIHK--RKEEKL 287
            ::.|.||.|.:.|.....|:.||.:|.:.|.:.|..|.|.:...|.|.||..:...|  ..||:|
  Fly   971 QKPYACDLCPQKFTQFVHLKLHKRLHTNDRPYVCQGCDKKYISASGLRTHWKTTSCKPNNLEEEL 1035

  Fly   288 TELA 291
            ...|
  Fly  1036 AMAA 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071
C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
C2H2 Zn finger 172..194 CDD:275368 6/21 (29%)
zf-H2C2_2 186..211 CDD:290200 11/24 (46%)
UFD2 <256..>294 CDD:227443 12/38 (32%)
C2H2 Zn finger 258..280 CDD:275368 7/21 (33%)
Blimp-1NP_001261442.1 SET 133..260 CDD:214614
C2H2 Zn finger 892..912 CDD:275368 5/19 (26%)
zf-H2C2_2 904..929 CDD:290200 9/26 (35%)
C2H2 Zn finger 920..940 CDD:275368 6/21 (29%)
zf-H2C2_2 932..957 CDD:290200 11/24 (46%)
C2H2 Zn finger 948..968 CDD:275368 8/19 (42%)
zf-H2C2_2 960..985 CDD:290200 8/24 (33%)
C2H2 Zn finger 976..996 CDD:275368 7/19 (37%)
C2H2 Zn finger 1004..1023 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457167
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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