DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6813 and CG12605

DIOPT Version :9

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001261387.1 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster


Alignment Length:168 Identity:50/168 - (29%)
Similarity:67/168 - (39%) Gaps:11/168 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 PSAEKVSAPTSLNHQKSIGGG-------TGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFL 175
            ||....:...||.|..| |.|       .|.|.|.:||:.....||...|...|..:.:......
  Fly   409 PSEPPENPAASLGHSSS-GNGENYAKRKRGCYKCCECGKQYATSSNLSRHKQTHRSLDSQSAKKC 472

  Fly   176 N-CERSFATRKELTSHTRIHTGEQPYVCVYCPRRFSSSGARQEHHRRHRNERRYECDTCKKSFVS 239
            | |.:::.:...|..|...|  :..:.|..|.:.||.....|.|.|.|..|:.|.|..|.|:|..
  Fly   473 NTCGKAYVSMPALAMHLLTH--KLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACVHCGKAFAD 535

  Fly   240 SGCLRKHKMIHVDARNHYCYVCQKHFKRISHLMTHLSS 277
            ...||.|...|...:|..|:.|.|.|...|:|..||.|
  Fly   536 RSNLRAHMQTHSGDKNFKCHRCNKTFALKSYLNKHLES 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071
C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
C2H2 Zn finger 172..194 CDD:275368 4/22 (18%)
zf-H2C2_2 186..211 CDD:290200 6/24 (25%)
UFD2 <256..>294 CDD:227443 9/22 (41%)
C2H2 Zn finger 258..280 CDD:275368 9/20 (45%)
CG12605NP_001261387.1 zf-C2H2 439..461 CDD:278523 7/21 (33%)
C2H2 Zn finger 441..461 CDD:275370 6/19 (32%)
C2H2 Zn finger 472..492 CDD:275368 4/19 (21%)
COG5048 492..>570 CDD:227381 26/79 (33%)
zf-C2H2 496..518 CDD:278523 7/21 (33%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
zf-H2C2_2 511..534 CDD:290200 9/22 (41%)
zf-C2H2 524..546 CDD:278523 8/21 (38%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 538..562 CDD:290200 8/23 (35%)
C2H2 Zn finger 554..571 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457110
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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