DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6813 and cg

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster


Alignment Length:36 Identity:10/36 - (27%)
Similarity:20/36 - (55%) Gaps:8/36 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DNYNIMKIKTNF------FIDEID--FHLRGDVTSE 61
            ||:::.::.:.|      |.:|.:  |||:...||:
  Fly   154 DNFDLYRLGSGFESKRAPFAEEEEATFHLQRAETSD 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 10/36 (28%)
C2H2 Zn finger 144..164 CDD:275368
C2H2 Zn finger 172..194 CDD:275368
UFD2 <256..>294 CDD:227443
C2H2 Zn finger 258..280 CDD:275368
cgNP_001097306.2 COG5048 287..>371 CDD:227381
C2H2 Zn finger 294..314 CDD:275368
zf-H2C2_2 306..331 CDD:463886
C2H2 Zn finger 322..342 CDD:275368
C2H2 Zn finger 350..370 CDD:275368
C2H2 Zn finger 378..398 CDD:275368
C2H2 Zn finger 406..426 CDD:275368
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 461..482 CDD:275368
C2H2 Zn finger 490..509 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.