DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6813 and CG17568

DIOPT Version :9

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:445 Identity:85/445 - (19%)
Similarity:142/445 - (31%) Gaps:181/445 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRICSRSDA----PIDLFGPGNGH----LVRQIHSITGVELSCKKEISGQMCTTCLDNLQAAIKF 62
            ||:|::.||    .:.:.....|:    |:..|.....|::..:.|:|..:||.|...:...|.|
  Fly    11 CRLCAKDDAHGNVKVQMNENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECYTLISELIDF 75

  Fly    63 RQRCIIAEKQN----LERIECDSKD-------------CSTD------PI---------IYE--- 92
            .:.  :.:.|:    |.|.|.|...             |..|      ||         :|:   
  Fly    76 AEH--VTKVQDIFEVLRRTETDGDQEMDVAALRQQFGLCDDDWTHIIKPIPALEMESDNVYQKPA 138

  Fly    93 ---------DIDDNQIE--------------------------------------SELDESILCP 110
                     :....::|                                      |:||...:..
  Fly   139 ELLKDFPLAETSSQEMEISKRTTTTHLIQTKKNVEMEIPKQEFIDLGPILLEKNTSQLDMEDVLD 203

  Fly   111 EV--KDLPMPSAEKVSAPTSL-NHQKS----------------------IGGGTGPYV------- 143
            |:  ::|..|..:..::|.|: |..||                      :...|.|..       
  Fly   204 ELPQEELSQPRLDSTTSPASMENDVKSEMLDSCEGDDDFLPVDGQLMDLVAVATTPNTLESTAEE 268

  Fly   144 --------CPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLN--------------CERSFATRKE 186
                    |..||::..|::::::|..|       .|..:.              |.::.::...
  Fly   269 KAKRGRMDCEKCGKVYRNRASYEKHLER-------ECRRIERRVKVDKTTTTCDICNKTLSSATA 326

  Fly   187 LTSHTR-IHTGEQPYVCVYCPRRFSSSGARQEHHRRHRNERRYECDTCK---------------- 234
            |..|.. ||...:||:|..|.::..:..|..||...|...|.:||..||                
  Fly   327 LKLHKEGIHQNVKPYICDSCGKQLKTITALNEHKLVHTESRPFECTVCKAGFKNRARLKAHYQIH 391

  Fly   235 --KSFVSSGCLRK---------HKMIHVDARNHYCYVCQKHFKRISHLMTHLSSN 278
              .|||.:.|.:|         ||::|.:.|...|.||...|||...|.|||.|:
  Fly   392 AEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKRSKTLKTHLLSH 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071 18/81 (22%)
C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
C2H2 Zn finger 172..194 CDD:275368 4/36 (11%)
zf-H2C2_2 186..211 CDD:290200 8/25 (32%)
UFD2 <256..>294 CDD:227443 11/23 (48%)
C2H2 Zn finger 258..280 CDD:275368 11/21 (52%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 17/77 (22%)
COG5048 <313..471 CDD:227381 38/134 (28%)
C2H2 Zn finger 314..335 CDD:275368 3/20 (15%)
C2H2 Zn finger 343..363 CDD:275368 5/19 (26%)
C2H2 Zn finger 371..391 CDD:275368 3/19 (16%)
C2H2 Zn finger 398..418 CDD:275368 4/19 (21%)
C2H2 Zn finger 426..446 CDD:275368 10/19 (53%)
zf-H2C2_2 439..463 CDD:290200 5/8 (63%)
C2H2 Zn finger 454..475 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.