DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6813 and wor

DIOPT Version :9

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster


Alignment Length:284 Identity:71/284 - (25%)
Similarity:103/284 - (36%) Gaps:64/284 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PIDLFGPGNGHLVRQ--IHSITGVELSCKKEISGQMCTTCLDNLQAAIKFRQRCIIAEKQNLERI 77
            |||:........:.|  |.|...:...|      |.|..|.......:|.:|             
  Fly   243 PIDMEEDQENQDINQLKIKSSNDLYYQC------QQCNKCYATYAGLVKHQQ------------- 288

  Fly    78 ECDSKDCSTDPIIYEDIDDNQIESE-------LDESILCPEVKDLPMPSAEKVSAPTSLNHQKSI 135
                      ...||..:...|.|:       :|::..|.:.....:.:|...||.:.   ||.:
  Fly   289 ----------THAYESTEYKIIRSQPGGSGAIVDQTEFCTDQASALIQAANVASAQSM---QKPV 340

  Fly   136 GGGTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHC----------VF--LNCERSFATRKELT 188
              |...|.|.|||:..:..|...:|       :.|||          ||  .||::::.:...|.
  Fly   341 --GVPRYHCQDCGKSYSTYSGLSKH-------QQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALK 396

  Fly   189 SHTRIHTGEQPYVCVYCPRRFSSSGARQEHHRRHRNERRYECDTCKKSFVSSGCLRKHKMIHVDA 253
            .|.|.||  .|..|..|.:.||.....|.|.|.|..|:.:.|..|.::|.....||.|...|.|.
  Fly   397 MHIRTHT--LPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDV 459

  Fly   254 RNHYCYVCQKHFKRISHLMTHLSS 277
            :.:.|..|.|.|.|:|.|..||.|
  Fly   460 KKYSCPTCTKSFSRMSLLAKHLQS 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071 12/62 (19%)
C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
C2H2 Zn finger 172..194 CDD:275368 8/33 (24%)
zf-H2C2_2 186..211 CDD:290200 9/24 (38%)
UFD2 <256..>294 CDD:227443 10/22 (45%)
C2H2 Zn finger 258..280 CDD:275368 10/20 (50%)
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 6/48 (13%)
C2H2 Zn finger 317..334 CDD:275368 3/16 (19%)
zf-C2H2 345..367 CDD:278523 7/28 (25%)
C2H2 Zn finger 347..367 CDD:275368 6/26 (23%)
PHA00732 379..>417 CDD:177300 13/39 (33%)
C2H2 Zn finger 382..402 CDD:275368 5/19 (26%)
zf-C2H2_8 405..482 CDD:292531 26/76 (34%)
zf-C2H2 406..428 CDD:278523 7/21 (33%)
C2H2 Zn finger 408..428 CDD:275368 7/19 (37%)
zf-H2C2_2 421..444 CDD:290200 7/22 (32%)
zf-C2H2 434..456 CDD:278523 6/21 (29%)
C2H2 Zn finger 436..456 CDD:275368 6/19 (32%)
zf-H2C2_2 448..473 CDD:290200 9/24 (38%)
C2H2 Zn finger 464..481 CDD:275368 7/16 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457216
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.