DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and prg

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:422 Identity:84/422 - (19%)
Similarity:142/422 - (33%) Gaps:153/422 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILNCRICSRSDAP--IDLFGP-----GNGHLVRQIHSITGVELSCKKEISGQMCTTCLDNLQAAI 60
            :..||:|..:..|  :::|..     .:..:.....|:..|:....:.:|..:|:.||:.|:.|.
  Fly    14 VSTCRLCHHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYDRNECLSELICSRCLEILEEAF 78

  Fly    61 KFR--------------------------------------QRCIIAE--KQNLERIECDSKDCS 85
            :.|                                      :.|||.|  .:||.....:.....
  Fly    79 ELRKGMQEREQSLQEQLKEMIKDHPKHRPGLNGNPGVFVPEEGCIIVEVDPENLAESSEEEFALG 143

  Fly    86 TDPIIYEDIDDNQIESELD------------ESILCPEVKDLPMPSAEK---------------- 122
            :|. .||:.||:..|.|.|            |.:..|...|....:|::                
  Fly   144 SDG-EYENYDDDDEEEEEDYDEEDEEDGQNGEDVDMPLGMDAAQMAAQQSVANNANTTEARPKRA 207

  Fly   123 ---------------------------------------VSAPTSLNHQKSIGGGTGPYVCPDCG 148
                                                   |:.|..::|.|::.....||||..|.
  Fly   208 FLCQYCDLGFTLPAECQEHELAAHDPNAPYCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCR 272

  Fly   149 RIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQPYVCVYCPRRFSSSG 213
            :....:|:.::||:.|||::.|.|..  |.:||:....||.|.|||:|.:|:||..|||.|.::.
  Fly   273 KGFVRRSDLKKHTIVHTGVRPFTCNV--CSKSFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAV 335

  Fly   214 ARQEHHRRHRNERRYECDTCKKSFVSSGCLRKHKMIHV--------------------------- 251
            ....|.|.|...:.::|..|..||.....|..|:.:|.                           
  Fly   336 EMMRHTRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVHTRRDMEQQQQMGLIPPMEGDLQQQALQA 400

  Fly   252 ---------DARNHYCYVCQKHFKRISHLMTH 274
                     ::|.::|.||.:.|:|...|..|
  Fly   401 KQKAAAQTKNSRYYHCDVCDRTFQRERDLQRH 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 20/117 (17%)
C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
C2H2 Zn finger 172..194 CDD:275368 8/21 (38%)
UFD2 <256..>294 CDD:227443 7/19 (37%)
C2H2 Zn finger 258..280 CDD:275368 7/17 (41%)
prgNP_609232.2 zf-AD 16..94 CDD:462262 14/77 (18%)
COG5048 <212..340 CDD:227381 34/129 (26%)
C2H2 Zn finger 239..260 CDD:275368 4/20 (20%)
C2H2 Zn finger 268..288 CDD:275368 5/19 (26%)
C2H2 Zn finger 296..316 CDD:275368 8/21 (38%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 352..372 CDD:275368 6/19 (32%)
C2H2 Zn finger 416..436 CDD:275368 7/17 (41%)
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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