DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and Cf2

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster


Alignment Length:362 Identity:76/362 - (20%)
Similarity:122/362 - (33%) Gaps:125/362 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRICSRSDAPIDLFGPGNGHLVRQIHSITGVELSCKKEISGQMCTTC---------LDNLQAAI- 60
            |.:||       ::|         |||.|......|....|.:|||.         ::..:||: 
  Fly   157 CLMCS-------IYG---------IHSATQQPNEYKCTQCGSICTTAMLAAGQQGFMEQQEAAVT 205

  Fly    61 -------------------KFRQRCIIAE--------------KQNLERIECDSKDCSTDPIIYE 92
                               :..|:.:.||              :|..|.:|...::      :.|
  Fly   206 PDDQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQQQELLEQQQRE------MQE 264

  Fly    93 DIDDNQIESELDESILCPEVKDLPMPSAEKVSAPTSLNHQKSIGGGT-----------GPYVCPD 146
            .....|:.....:..|..:...|.:|       |.::...|:..||.           .|....|
  Fly   265 QAQQQQVHHHQQDQDLAGDQVALKVP-------PLTVKLNKNANGGAIVSHPQVIIKEEPLSLSD 322

  Fly   147 CGRIINNKSNFQ--------------------------EHTLRHTGIKNFHCVFLNCERSFATRK 185
            .|.::|:...:.                          .|.:||      .|.  :|.::|.|..
  Fly   323 SGDVVNSVPVYAIQANPGVPAPASSGVLVGTQTVPADLAHKIRH------KCP--DCPKTFKTPG 379

  Fly   186 ELTSHTRIHTG-------EQPYVCVYCPRRFSSSGARQEHHRRHRNERRYECDTCKKSFVSSGCL 243
            .|..|.:||||       |:||.|.||.:.|:.|...::|.|.|..|:.:.|..|:|||.....|
  Fly   380 TLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYL 444

  Fly   244 RKHKMIHVDARNHYCYVCQKHFKRISHLMTHLSSNIH 280
            .||...|...:.:.|..|.|.|.:.|.|..| ::.:|
  Fly   445 TKHIRTHTGEKPYTCPYCDKRFTQRSALTVH-TTKLH 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 19/112 (17%)
C2H2 Zn finger 144..164 CDD:275368 4/45 (9%)
C2H2 Zn finger 172..194 CDD:275368 6/21 (29%)
UFD2 <256..>294 CDD:227443 8/25 (32%)
C2H2 Zn finger 258..280 CDD:275368 7/21 (33%)
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 37/114 (32%)
C2H2 Zn finger 368..388 CDD:275368 6/21 (29%)
C2H2 Zn finger 403..423 CDD:275368 7/19 (37%)
C2H2 Zn finger 431..451 CDD:275368 8/19 (42%)
zf-H2C2_2 443..468 CDD:463886 8/24 (33%)
C2H2 Zn finger 459..480 CDD:275368 7/21 (33%)

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