DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and CG15436

DIOPT Version :9

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_608840.1 Gene:CG15436 / 33657 FlyBaseID:FBgn0031610 Length:346 Species:Drosophila melanogaster


Alignment Length:291 Identity:75/291 - (25%)
Similarity:116/291 - (39%) Gaps:45/291 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRICSRSDAPIDLFGPGNGHLV--------------RQIHSITGVELSCKKEISGQMCTTCLDNL 56
            ||:|      :|:    :|.||              ..|...||.|:......|..:|..|.:::
  Fly     5 CRVC------MDI----SGKLVNIFDARRRTRVSIAEMIAQCTGFEVKRGDLFSEMICPQCYEDV 59

  Fly    57 QAAIKFRQRCIIAEKQNLERIECDSKDCSTDPIIYEDIDDNQIESELDESILCPEVKDLPMPSAE 121
            ::|...||.|     :...:..|..:|        |.|:|.......:|.....|.:|..:.||.
  Fly    60 KSAYGIRQTC-----EESHQFYCRVRD--------EGIEDALCALLEEEDWEISEDEDARIDSAS 111

  Fly   122 KVSAPTSLNHQKSIGGGTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKE 186
            ........:.:|.      .:.|.:|.:....|..|..|...|...::|.|.:  |:|:|..|..
  Fly   112 AADDDGKSDSKKV------AFECRECHKKYQRKGTFLRHMRTHMDGQSFPCPY--CKRNFRLRVT 168

  Fly   187 LTSHTRIHTGEQPYVCVYCPRRFSSSGARQEHHRRHRNERRYECDTCKKSFVSSGCLRKHKMIHV 251
            |.:|.:.|...:||.|.:|.:.|:.....|.|.|.|..||.::|..|.|:|:.|..||:|...|.
  Fly   169 LKAHMKTHNAAKPYECSHCAKTFAQQSTLQSHERTHTGERPFKCSQCSKTFIKSSDLRRHIRTHG 233

  Fly   252 DARNHYCYVCQKHFKRISHLMTHLSSNIHKR 282
            ..|...|..|.|.|.|..||..|..|:..:|
  Fly   234 SERPFKCSKCTKTFTRKFHLDNHFRSHTGER 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071 18/83 (22%)
C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
C2H2 Zn finger 172..194 CDD:275368 7/21 (33%)
zf-H2C2_2 186..211 CDD:290200 8/24 (33%)
UFD2 <256..>294 CDD:227443 10/27 (37%)
C2H2 Zn finger 258..280 CDD:275368 9/21 (43%)
CG15436NP_608840.1 zf-AD 4..78 CDD:285071 18/87 (21%)
C2H2 Zn finger 128..148 CDD:275368 5/19 (26%)
C2H2 Zn finger 156..176 CDD:275368 7/21 (33%)
COG5048 <180..341 CDD:227381 31/85 (36%)
C2H2 Zn finger 184..204 CDD:275368 6/19 (32%)
zf-H2C2_2 197..219 CDD:290200 9/21 (43%)
C2H2 Zn finger 212..232 CDD:275368 8/19 (42%)
zf-H2C2_2 224..249 CDD:290200 9/24 (38%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
zf-H2C2_2 252..276 CDD:290200 5/13 (38%)
C2H2 Zn finger 268..288 CDD:275368
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..341 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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