DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and CG44002

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster


Alignment Length:339 Identity:77/339 - (22%)
Similarity:128/339 - (37%) Gaps:81/339 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRIC------------SRSDAPIDLFGPGNGHLVRQIHSITGVELSCKKEISGQMCTTCLDNLQA 58
            ||:|            .|.|.|:.:     .|::.:   .||.::.....:...:|..|:.:...
  Fly     5 CRVCLASSKNMVNIFEERQDLPVSI-----AHMIIE---CTGFKVEKGDSLPHSICPPCVKDAHN 61

  Fly    59 A---IKFRQRC---------IIAEKQNLERIECDSKDCSTDPIIYEDIDDNQI------------ 99
            |   ||..:|.         .:.|::..|.:..:..|  :|.:|..|..:.::            
  Fly    62 AFTIIKTYERSYQVFYEVQDTVLEEELSEDVIIELSD--SDEVILIDEQEEKVHLSENKAPTNEV 124

  Fly   100 ----ESEL--------DESILC---------PEVKDL------------PMPSAEKVSAPTSLNH 131
                ||:.        |:..:|         |.:.:|            ||.|..:.:....|..
  Fly   125 STQEESKTAQSDNVSEDKGHICTQCHMSFRRPGLLELHILRHHTTDGPRPMSSTSEHAVKEELRT 189

  Fly   132 QKSIGGGTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTG 196
            :.........:.|..|.:...:|::...|...|||.|.|.|..  |::.||....:..|.|.|||
  Fly   190 KARQLSRNSTHTCRLCNKTFCSKASCVRHQKTHTGEKPFACEI--CQKPFADLASVKRHLRTHTG 252

  Fly   197 EQPYVCVYCPRRFSSSGARQEHHRRHRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVC 261
            |:|:.|:.|...||...|.::|.|.|..||.|:||.|.|.|......|||.|.|...:...|..|
  Fly   253 ERPFKCLTCQSAFSDGSALRQHIRIHTGERPYKCDMCDKFFRERSDARKHMMSHTAEKRFKCSQC 317

  Fly   262 QKHFKRISHLMTHL 275
            ::.|::...|..|:
  Fly   318 ERRFRQPKGLRRHV 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 16/93 (17%)
C2H2 Zn finger 144..164 CDD:275368 4/19 (21%)
C2H2 Zn finger 172..194 CDD:275368 6/21 (29%)
UFD2 <256..>294 CDD:227443 5/20 (25%)
C2H2 Zn finger 258..280 CDD:275368 5/18 (28%)
CG44002NP_608754.1 zf-AD 4..74 CDD:462262 15/76 (20%)
C2H2 Zn finger 146..166 CDD:275368 3/19 (16%)
COG5048 <162..302 CDD:227381 41/141 (29%)
C2H2 Zn finger 202..222 CDD:275368 4/19 (21%)
C2H2 Zn finger 230..250 CDD:275368 6/21 (29%)
C2H2 Zn finger 258..278 CDD:275368 7/19 (37%)
SUF4-like 282..>342 CDD:411020 17/50 (34%)
C2H2 Zn finger 286..311 CDD:411020 10/24 (42%)
C2H2 Zn finger 286..306 CDD:275368 9/19 (47%)
C2H2 Zn finger 314..335 CDD:411020 5/18 (28%)
C2H2 Zn finger 314..333 CDD:275368 5/18 (28%)

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