DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and zld

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_608356.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster


Alignment Length:268 Identity:65/268 - (24%)
Similarity:105/268 - (39%) Gaps:42/268 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GHLVRQIHSITGVELSCKKEISGQMCTTCLDNLQAAIKFRQRCIIAEKQNLERIECDSKDCSTDP 88
            |....|..::|.:.......:|....|..|:...|.:....:....|:..::..:.|..      
  Fly  1203 GQQEAQTPTLTVLSTPYSPTVSSSRATPALEMDMATLMQHHQDYEMEQYQMQHQQLDQM------ 1261

  Fly    89 IIYEDIDDNQIESELDESILCPEVKDL-PMPSAEK-----VSAPTSLNHQKSIGGGTGPYVCPDC 147
                .....|::.:..:.||..:.:.: ..|.|:|     .:..|:...:.|..|.|.|:     
  Fly  1262 ----QQHQQQLDHQQQQQILADQTQTMAQQPLAKKRRGGNATPSTTKRRRNSSVGSTSPH----- 1317

  Fly   148 GRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTR-IHTGEQPYVCVYCPRRFSS 211
                       ..||....||   |  |.|::.|.....||.|.: .|:||.|:.|..|.:||.|
  Fly  1318 -----------STTLPSGRIK---C--LECDKEFTKNCYLTQHNKSFHSGEYPFRCQKCGKRFQS 1366

  Fly   212 SGARQEHHRRHR-NERRYECDTCKKSFVSSGCLRKH-KMIHVDARNHYCYVCQKHFKRISHLMTH 274
            ......|..||| .::.::|:.|.|.|.....||:| :.||...:.|.|.:|:|.|.|..||..|
  Fly  1367 EDVYTTHLGRHRTQDKPHKCELCPKQFHHKTDLRRHVEAIHTGLKQHMCDICEKGFCRKDHLRKH 1431

  Fly   275 LSSNIHKR 282
            |.:  |.|
  Fly  1432 LET--HNR 1437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 8/51 (16%)
C2H2 Zn finger 144..164 CDD:275368 2/19 (11%)
C2H2 Zn finger 172..194 CDD:275368 7/22 (32%)
UFD2 <256..>294 CDD:227443 12/27 (44%)
C2H2 Zn finger 258..280 CDD:275368 9/21 (43%)
zldNP_608356.1 zf-C2H2_jaz 552..577 CDD:432381
SUF4-like 1325..>1366 CDD:411020 17/45 (38%)
C2H2 Zn finger 1328..1349 CDD:411020 7/22 (32%)
C2H2 Zn finger 1328..1349 CDD:275368 7/22 (32%)
C2H2 Zn finger 1357..1377 CDD:275368 6/19 (32%)
C2H2 Zn finger 1386..1407 CDD:275368 7/20 (35%)
zf-C2H2 1413..1435 CDD:395048 10/23 (43%)
C2H2 Zn finger 1415..1435 CDD:275368 9/21 (43%)
Blue background indicates that the domain is not in the aligned region.

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