DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and klf-3

DIOPT Version :9

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001022205.1 Gene:klf-3 / 191713 WormBaseID:WBGene00003480 Length:315 Species:Caenorhabditis elegans


Alignment Length:139 Identity:41/139 - (29%)
Similarity:59/139 - (42%) Gaps:26/139 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 PEVK-DLPM---------------PSAEKVSAPTSLNHQKSI-GGGTGP-------YVC--PDCG 148
            |.:| ::||               ||:...|..:.|..:..| .....|       :.|  |.|.
 Worm   174 PAIKMEIPMHPLPHNGELDSTRSSPSSTTSSERSPLQRKSRIESNKRNPTDKKFVVHACTYPGCF 238

  Fly   149 RIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQPYVCVYCPRRFSSSG 213
            :..:..|:.:.|...|:|.|.|.|.:.||...||...|||.|.|.|||::|:.|..|.|.|:.|.
 Worm   239 KKYSKSSHLKAHERTHSGEKPFVCKWQNCSWKFARSDELTRHMRKHTGDKPFRCSLCDRNFARSD 303

  Fly   214 ARQEHHRRH 222
            ....|.:||
 Worm   304 HLSLHMKRH 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071
C2H2 Zn finger 144..164 CDD:275368 5/21 (24%)
C2H2 Zn finger 172..194 CDD:275368 10/21 (48%)
zf-H2C2_2 186..211 CDD:290200 13/24 (54%)
UFD2 <256..>294 CDD:227443
C2H2 Zn finger 258..280 CDD:275368
klf-3NP_001022205.1 C2H2 Zn finger 235..254 CDD:275368 4/18 (22%)
C2H2 Zn finger 262..284 CDD:275368 10/21 (48%)
zf-H2C2_2 276..301 CDD:290200 13/24 (54%)
C2H2 Zn finger 292..312 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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