DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and blmp-1

DIOPT Version :9

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001251370.1 Gene:blmp-1 / 172917 WormBaseID:WBGene00003847 Length:817 Species:Caenorhabditis elegans


Alignment Length:174 Identity:55/174 - (31%)
Similarity:78/174 - (44%) Gaps:12/174 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 VSAPTSLNHQKSIGG----------GTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNC 177
            |:..:|.::..|..|          |...|.|.||.:.....||.:.|...|||.:.|.|..  |
 Worm   479 VNHSSSSHNDSSFNGVPNYVQQQENGKTRYACKDCNKTFGQLSNLKVHVRTHTGERPFKCEI--C 541

  Fly   178 ERSFATRKELTSHTRIHTGEQPYVCVYCPRRFSSSGARQEHHRRHRNERRYECDTCKKSFVSSGC 242
            .:.|.....|..|..:||||:|:.|..|.:||||:...:.|.|.|..::.|.||.|...|.....
 Worm   542 TKEFTQLAHLQKHHLVHTGERPHRCDICDKRFSSTSNLKTHLRLHNGQKPYTCDVCDAKFTQYVH 606

  Fly   243 LRKHKMIHVDARNHYCYVCQKHFKRISHLMTHLSSNIHKRKEEK 286
            ||.||.:|.:.|.:.|..|.|.:...|.|.||..:...|.::.|
 Worm   607 LRLHKRLHANERPYSCGTCGKKYISPSGLRTHWKTTTCKEEDMK 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071
C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
C2H2 Zn finger 172..194 CDD:275368 5/21 (24%)
zf-H2C2_2 186..211 CDD:290200 11/24 (46%)
UFD2 <256..>294 CDD:227443 9/31 (29%)
C2H2 Zn finger 258..280 CDD:275368 7/21 (33%)
blmp-1NP_001251370.1 SET 119..247 CDD:214614
zf-C2H2 508..530 CDD:278523 7/21 (33%)
C2H2 Zn finger 510..530 CDD:275368 6/19 (32%)
zf-H2C2_2 522..547 CDD:290200 9/26 (35%)
C2H2 Zn finger 538..558 CDD:275368 5/21 (24%)
zf-H2C2_2 550..575 CDD:290200 11/24 (46%)
C2H2 Zn finger 566..586 CDD:275368 8/19 (42%)
zf-H2C2_2 578..603 CDD:290200 8/24 (33%)
C2H2 Zn finger 594..614 CDD:275368 8/19 (42%)
zf-H2C2_2 606..631 CDD:290200 9/24 (38%)
ARS2 <620..772 CDD:282772 9/31 (29%)
C2H2 Zn finger 622..641 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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