DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and LOC108183709

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_017211121.3 Gene:LOC108183709 / 108183709 -ID:- Length:359 Species:Danio rerio


Alignment Length:277 Identity:83/277 - (29%)
Similarity:112/277 - (40%) Gaps:62/277 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRICSRSDAPIDLFGPGNGHLVRQIHSI--TGVELSCKKEISGQMCTTCLDNLQAAIKFRQRCII 68
            |..|.:|      || |||:|  :||.|  ||     ||..:   ||.|                
Zfish    68 CTQCGKS------FG-GNGNL--KIHMIIHTG-----KKPFT---CTQC---------------- 99

  Fly    69 AEKQNLERIECDSKDCSTDPIIYEDIDDNQIESELDESILCPEVKDLPMPSAEKVSAPTSLNHQK 133
                        .|..|..    ..::|:.:....::...|.:       ..:.....:.||...
Zfish   100 ------------GKSFSQS----SHLNDHMMIHTGEKPFTCTQ-------CGKSFIRLSLLNQHM 141

  Fly   134 SIGGGTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQ 198
            .|..|..|:.|..||:.....|...||.:.|||.|.|.|.  .|.:||:...:|..|.||||||:
Zfish   142 MIHTGEKPFTCTQCGKSFRQSSYLNEHMMIHTGEKPFTCT--QCWKSFSRSSDLNLHMRIHTGEK 204

  Fly   199 PYVCVYCPRRFSSSGARQEHHRRHRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQK 263
            |:.|..|.:.||.|.:..:|.|.|..|:.:.|..|.|||..|..|.||.|||...:...|..|.|
Zfish   205 PFTCTQCGKSFSCSSSLNKHMRIHTGEKPFTCTQCGKSFSCSSSLNKHMMIHTGEKPFTCTQCGK 269

  Fly   264 HFKRISHLMTHLSSNIH 280
            .|.|.|:|..|:  .||
Zfish   270 SFGRSSYLNQHM--RIH 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 19/71 (27%)
C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
C2H2 Zn finger 172..194 CDD:275368 7/21 (33%)
UFD2 <256..>294 CDD:227443 10/25 (40%)
C2H2 Zn finger 258..280 CDD:275368 8/21 (38%)
LOC108183709XP_017211121.3 C2H2 Zn finger 68..88 CDD:275368 12/28 (43%)
COG5048 <92..252 CDD:227381 53/203 (26%)
C2H2 Zn finger 96..116 CDD:275368 6/51 (12%)
C2H2 Zn finger 124..144 CDD:275368 3/26 (12%)
C2H2 Zn finger 152..172 CDD:275368 6/19 (32%)
C2H2 Zn finger 180..200 CDD:275368 7/21 (33%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
C2H2 Zn finger 236..256 CDD:275368 10/19 (53%)
zf-H2C2_2 248..271 CDD:463886 9/22 (41%)
C2H2 Zn finger 264..284 CDD:275368 8/21 (38%)
zf-H2C2_2 276..301 CDD:463886 4/11 (36%)
C2H2 Zn finger 292..312 CDD:275368
zf-H2C2_2 304..329 CDD:463886
C2H2 Zn finger 320..340 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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