DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6813 and LOC100488006

DIOPT Version :10

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_002937452.2 Gene:LOC100488006 / 100488006 XenbaseID:XB-GENE-29079027 Length:383 Species:Xenopus tropicalis


Alignment Length:316 Identity:83/316 - (26%)
Similarity:121/316 - (38%) Gaps:90/316 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRICSRSDAPIDLFGPGNGHLVRQIHSITGVELSCKKEISGQMCTTCLDNLQAAIKFRQRCIIAE 70
            |..|.||.:.:       .||:....|.||     :|.....||..|         |.::|.:  
 Frog   124 CIDCGRSFSYV-------SHLIIHRRSHTG-----EKPFECGMCGKC---------FARKCSL-- 165

  Fly    71 KQNLERIECDSKDCSTDPIIYEDIDDNQIESELDESILCPEVKDLPMPSAEK--VSAPTSLNHQK 133
                              :|:|.|...:              :..|.|...|  .|:.|...| |
 Frog   166 ------------------VIHERIHTGE--------------RPYPCPDCGKRFTSSATLTTH-K 197

  Fly   134 SIGGGTGPYVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQ 198
            .|..|..||:|.:||:...:.|:...|...|||.|.:.|  ..|.::|:....|.:|||.||||:
 Frog   198 RIHTGERPYICWECGKSFTSNSSLFLHNRTHTGEKPYEC--KQCGKTFSCSSALVTHTRTHTGEK 260

  Fly   199 PYVCVYCPRRFSSSGARQEH---------------------------HRR-HRNERRYECDTCKK 235
            ||.|..|.:.|..:....:|                           |:| |..||.:.|..|.|
 Frog   261 PYTCAECGKSFFDNSRLLKHQATHTGEWAYMCTICGKGFTCISNLNVHQRSHTGERPFSCGQCGK 325

  Fly   236 SFVSSGCLRKHKMIHVDARNHYCYVCQKHFKRISHLMTHLSSNIHKRKEEKLTELA 291
            ||.::..|.:|:..|...|.:.|.:|.|.|.|..|::||  ..||.:|.||...|:
 Frog   326 SFTNNSYLVRHQTTHTGERPYPCPICGKTFTRKGHVVTH--QKIHTKKMEKTKGLS 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 15/69 (22%)
C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
C2H2 Zn finger 172..194 CDD:275368 7/21 (33%)
UFD2 <256..>294 CDD:227443 14/36 (39%)
C2H2 Zn finger 258..280 CDD:275368 8/21 (38%)
LOC100488006XP_002937452.2 C2H2 Zn finger 124..144 CDD:275368 6/26 (23%)
zf-H2C2_2 136..161 CDD:463886 10/38 (26%)
C2H2 Zn finger 152..172 CDD:275368 7/48 (15%)
COG5048 <177..327 CDD:227381 45/152 (30%)
C2H2 Zn finger 180..200 CDD:275368 6/20 (30%)
C2H2 Zn finger 208..228 CDD:275368 5/19 (26%)
C2H2 Zn finger 236..256 CDD:275368 7/21 (33%)
C2H2 Zn finger 264..284 CDD:275368 4/19 (21%)
C2H2 Zn finger 292..312 CDD:275368 2/19 (11%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)
zf-H2C2_2 332..357 CDD:463886 8/24 (33%)
C2H2 Zn finger 348..368 CDD:275368 8/21 (38%)

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