DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6813 and ZSCAN30

DIOPT Version :9

Sequence 1:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001106205.1 Gene:ZSCAN30 / 100101467 HGNCID:33517 Length:494 Species:Homo sapiens


Alignment Length:259 Identity:71/259 - (27%)
Similarity:104/259 - (40%) Gaps:36/259 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 HLVRQIHSITGVELSCKKEISGQMCTTCLDNLQAAIKFRQRCIIAEKQNLERIECDSKDCSTDPI 89
            |.|.:.|           |..|.......|..|.::..|::.       .|..:|....|.:..:
Human   270 HSVLESH-----------ESEGSFSMNSNDITQQSVDTREKL-------YECFDCGKAFCQSSKL 316

  Fly    90 I-YEDIDDNQIESELDESILCPEVKDLPMPSAEKVSAPTSLNHQKSIGGGTGPYVCPDCGRIINN 153
            | ::.|...      :....|.|       ..:..|..:.|...:.|..|..||.|.:||:....
Human   317 IRHQRIHTG------ERPYACKE-------CGKAFSLSSDLVRHQRIHSGEKPYECCECGKAFRG 368

  Fly   154 KSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQPYVCVYCPRRFSSSGARQEH 218
            .|....|...|||.|.:.|.  .|.::|:....|..|.:||||::.|.|:.|.:.|..|....||
Human   369 SSELIRHRRIHTGEKPYECG--ECGKAFSRSSALIQHKKIHTGDKSYECIACGKAFGRSSILIEH 431

  Fly   219 HRRHRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKHFKRISHLMTHLSSNIHKR 282
            .|.|..|:.|||:.|.|||..|..|.:|:.||...:.:.|..|:|.|:..|.||.|  ...|.|
Human   432 QRIHTGEKPYECNECGKSFNQSSALTQHQRIHTGEKPYECSECRKTFRHRSGLMQH--QRTHTR 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071 8/50 (16%)
C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
C2H2 Zn finger 172..194 CDD:275368 5/21 (24%)
zf-H2C2_2 186..211 CDD:290200 10/24 (42%)
UFD2 <256..>294 CDD:227443 10/27 (37%)
C2H2 Zn finger 258..280 CDD:275368 8/21 (38%)
ZSCAN30NP_001106205.1 SCAN 44..154 CDD:128708
SCAN 44..122 CDD:280241
COG5048 281..>360 CDD:227381 16/98 (16%)
zf-C2H2 301..323 CDD:278523 4/21 (19%)
C2H2 Zn finger 303..323 CDD:275368 3/19 (16%)
zf-H2C2_2 316..339 CDD:290200 4/35 (11%)
COG5048 <328..479 CDD:227381 51/159 (32%)
C2H2 Zn finger 331..351 CDD:275368 4/26 (15%)
zf-H2C2_2 343..366 CDD:290200 8/22 (36%)
C2H2 Zn finger 359..379 CDD:275368 5/19 (26%)
zf-H2C2_2 371..396 CDD:290200 8/26 (31%)
C2H2 Zn finger 387..407 CDD:275368 5/21 (24%)
zf-H2C2_2 399..424 CDD:290200 10/24 (42%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-H2C2_2 428..452 CDD:290200 12/23 (52%)
C2H2 Zn finger 443..463 CDD:275368 8/19 (42%)
zf-H2C2_2 455..480 CDD:290200 8/24 (33%)
C2H2 Zn finger 471..491 CDD:275368 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4733
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.