DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6808 and ZNF180

DIOPT Version :9

Sequence 1:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_037388.3 Gene:ZNF180 / 7733 HGNCID:12970 Length:692 Species:Homo sapiens


Alignment Length:474 Identity:113/474 - (23%)
Similarity:179/474 - (37%) Gaps:179/474 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKWSMCRTCRKKGTQSTLQSLFESNAHKLLISYAGTSVKPDDGLPDQICTVCLMQLEEVDRFLSA 69
            :.|.:.....||.:.|. |.:|:.              :|.:|       |.:.:....|.:||:
Human   109 VSWDLATAVGKKDSTSK-QRIFDE--------------EPANG-------VKIERFTRDDPWLSS 151

  Fly    70 CKQSDAHLRSLVRQTLSSASAFETLEDKDQLEQKKRARKQNISGRLIEENPINFKTQENAL---E 131
            |::.|                    :.|||||  |:..||.|   |::|  :.| ||..|:   .
Human   152 CEEVD--------------------DCKDQLE--KQQEKQEI---LLQE--VAF-TQRKAVIHER 188

  Fly   132 TTKDDE---------------ILPINKFSSDFV-----FDLN--VNA-----ENE---------- 159
            ..|.||               ::||.......|     :.||  ||:     |||          
Human   189 VCKSDETGEKSGLNSSLFSSPVIPIRNHFHKHVSHAKKWHLNAAVNSHQKINENETLYENNECGK 253

  Fly   160 ---------------KD-------------------IHQE--------DYTISDMDLDREIS--- 179
                           ||                   ||::        |:......|:.:||   
Human   254 PPQSIHLIQFTRTQTKDKSYGFSDRIQSFCHGTPLHIHEKIHGGGKTFDFKECGQVLNPKISHNE 318

  Fly   180 -------DQNYSETYSQESSAATDSIQETSEDYHNLEPSADYVIDLGVACEPDKYRCKICSNTYR 237
                   :..|..:.:..||:.|.:::..||:                  :|  :.|..|..::.
Human   319 QQRIPFEESQYKCSETSHSSSLTQNMRNNSEE------------------KP--FECNQCGKSFS 363

  Fly   238 CLSQLNAHSQVHRKEKDHQCEVCQKTFRAACNLKTHMRTHTGEKPYQCCYCSRRFADNSTHRKHE 302
            ..|.|.||.:.|..||.::|..|.|:|..:.:|.:|.|||||||||:|..|.:.|:.:.....|:
Human   364 WSSHLVAHQRTHTGEKPYECSECGKSFSRSSHLVSHQRTHTGEKPYRCNQCGKSFSQSYVLVVHQ 428

  Fly   303 RLHTNERPYACNICGKTFSLSSSRNAHYYLHSSEKSHKCLMCKKEFRLKHQLTAHEK-------- 359
            |.||.|:||.||.|||:|..|....||...|:.||.::|..|.|.|...::|.||::        
Human   429 RTHTGEKPYECNQCGKSFRQSYKLIAHQRTHTGEKPYECNQCGKSFIQSYKLIAHQRIHTGEKPY 493

  Fly   360 ---------SLAHRLIAKE 369
                     |.:::|:|.:
Human   494 ECNQCGKSFSQSYKLVAHQ 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 13/69 (19%)
C2H2 Zn finger 229..249 CDD:275368 6/19 (32%)
zf-C2H2 255..277 CDD:278523 7/21 (33%)
C2H2 Zn finger 257..277 CDD:275368 7/19 (37%)
zf-H2C2_2 269..293 CDD:290200 13/23 (57%)
C2H2 Zn finger 285..305 CDD:275368 5/19 (26%)
zf-H2C2_2 299..321 CDD:290200 12/21 (57%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
C2H2 Zn finger 341..359 CDD:275368 7/17 (41%)
ZNF180NP_037388.3 KRAB 72..133 CDD:214630 6/38 (16%)
KRAB 72..111 CDD:279668 0/1 (0%)
C2H2 Zn finger 249..267 CDD:275368 0/17 (0%)
C2H2 Zn finger 275..295 CDD:275368 2/19 (11%)
COG5048 332..692 CDD:227381 62/201 (31%)
C2H2 Zn finger 355..375 CDD:275368 6/19 (32%)
zf-H2C2_2 367..392 CDD:290200 10/24 (42%)
C2H2 Zn finger 383..403 CDD:275368 7/19 (37%)
zf-H2C2_2 395..420 CDD:290200 14/24 (58%)
C2H2 Zn finger 411..431 CDD:275368 5/19 (26%)
zf-H2C2_2 424..448 CDD:290200 13/23 (57%)
C2H2 Zn finger 439..459 CDD:275368 9/19 (47%)
zf-H2C2_2 455..476 CDD:290200 8/20 (40%)
C2H2 Zn finger 467..487 CDD:275368 7/19 (37%)
zf-H2C2_2 483..504 CDD:290200 1/20 (5%)
C2H2 Zn finger 495..515 CDD:275368 3/18 (17%)
zf-H2C2_2 508..531 CDD:290200 2/5 (40%)
C2H2 Zn finger 523..543 CDD:275368
zf-H2C2_2 536..560 CDD:290200
C2H2 Zn finger 551..571 CDD:275368
zf-H2C2_2 563..588 CDD:290200
C2H2 Zn finger 579..599 CDD:275368
zf-H2C2_2 592..616 CDD:290200
C2H2 Zn finger 607..627 CDD:275368
zf-H2C2_2 620..643 CDD:290200
C2H2 Zn finger 635..655 CDD:275368
zf-H2C2_2 648..670 CDD:290200
C2H2 Zn finger 663..683 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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