DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6808 and Zfp110

DIOPT Version :9

Sequence 1:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001347505.1 Gene:Zfp110 / 65020 MGIID:1890378 Length:832 Species:Mus musculus


Alignment Length:485 Identity:95/485 - (19%)
Similarity:162/485 - (33%) Gaps:158/485 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KKGTQSTL-QSLFESNA---HKLLISYAGTSVKPDDGLPDQICTVCLMQLEEVDRFLSACKQSDA 75
            :.|||||: :|:.|...   |.:..:..|.  ..:.|.|.:             :|..:.|..|.
Mouse   356 RNGTQSTVFESILEDGVKEMHTIESNQVGN--LQEKGHPQK-------------KFSESSKSQDQ 405

  Fly    76 HLRSLVRQTLSSASAFETLEDKDQLEQKKRARKQNIS---GRLIEE--------------NPI-- 121
            ..|...:.:|:.....:.::.|.:...|::.|...||   |..|.:              .|:  
Mouse   406 TSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTH 470

  Fly   122 --NFKTQENALE-----TTKDDEILPINKFSSDFVFDLNVNAENEKDIHQEDYTISDMDLD---- 175
              :.|.|:...|     |::|    ||.......|:.....::....:...|..:||:...    
Mouse   471 GSSIKNQQQGSEQGKPGTSRD----PITLTVPAKVYQKATGSKESILMDSSDAMVSDVPPKIHQK 531

  Fly   176 ----REISDQNYS-------ETYSQESSA--ATD--------------------SIQETSEDYHN 207
                .::.:.|.|       :.:..||.|  |:|                    ::|.....:.:
Mouse   532 GPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKH 596

  Fly   208 LEP--------------------------------SADYVIDLGVACEP---------------- 224
            ::|                                ..|..|:..:.|:|                
Mouse   597 IKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRR 661

  Fly   225 ------------------------DKYRCKICSNTYRCLSQLNAHSQVHRKEKDHQCEVCQKTFR 265
                                    ...||..|...:|.....:.|.::|..|:.:.|..|.|.|.
Mouse   662 ANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFV 726

  Fly   266 AACNLKTHMRTHTGEKPYQCCYCSRRFADNSTHRKHERLHTNERPYACNICGKTFSLSSSRNAHY 330
            .:.:|..|:|.|:||:|::|..|.|.|.|.|...:|.|.||..:||.|..|||.|..||....|.
Mouse   727 QSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHE 791

  Fly   331 YLHSSEKSHKCLMCKKEFRLKHQLTAHEKS 360
            ..|:.|:.:.|:.|.|.|.....|..|:|:
Mouse   792 RTHTGERPYVCIKCGKAFTQSSHLIGHQKT 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 14/67 (21%)
C2H2 Zn finger 229..249 CDD:275368 4/19 (21%)
zf-C2H2 255..277 CDD:278523 7/21 (33%)
C2H2 Zn finger 257..277 CDD:275368 7/19 (37%)
zf-H2C2_2 269..293 CDD:290200 10/23 (43%)
C2H2 Zn finger 285..305 CDD:275368 8/19 (42%)
zf-H2C2_2 299..321 CDD:290200 10/21 (48%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
C2H2 Zn finger 341..359 CDD:275368 6/17 (35%)
Zfp110NP_001347505.1 KRAB 18..77 CDD:214630
SCAN 159..246 CDD:307924
KRAB 283..324 CDD:307490
C2H2 Zn finger 663..682 CDD:275370 0/18 (0%)
C2H2 Zn finger 690..710 CDD:275368 4/19 (21%)
zf-H2C2_2 702..727 CDD:316026 7/24 (29%)
C2H2 Zn finger 718..738 CDD:275368 7/19 (37%)
zf-H2C2_2 730..754 CDD:316026 10/23 (43%)
C2H2 Zn finger 746..766 CDD:275368 8/19 (42%)
zf-C2H2 772..794 CDD:306579 9/21 (43%)
C2H2 Zn finger 774..794 CDD:275368 8/19 (42%)
zf-H2C2_2 786..811 CDD:316026 7/24 (29%)
C2H2 Zn finger 802..822 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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