DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6808 and Zfp24

DIOPT Version :9

Sequence 1:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001344376.1 Gene:Zfp24 / 59057 MGIID:1929704 Length:368 Species:Mus musculus


Alignment Length:322 Identity:82/322 - (25%)
Similarity:142/322 - (44%) Gaps:67/322 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VKPDDGLPDQICTVCLMQLEEVDRFLSACKQSDAHLRSLVRQ--TLSSASAFETLED-KDQLEQ- 102
            ::|:....:||     ::|..:::|::...:   .|::.||:  ..:...|...||| :.:|:. 
Mouse    81 LRPETHTKEQI-----LELVVLEQFVAILPK---ELQTWVREHHPENGEEAVAVLEDLESELDDP 137

  Fly   103 ----KKRARKQNISGRLIEENPINFKTQENALETTKDDEILPINKFSSDFVFDLNVNAENEK--- 160
                ..|.:|:.:   |:||           :.:.:|.:.||.::..:         .||:.   
Mouse   138 GQPVSLRRQKREV---LVEE-----------ITSQEDAQGLPSSELDA---------VENQLKWA 179

  Fly   161 --DIHQEDYTISDMDLDREISDQNYSETYSQESSAATDSIQETSEDYHNLEPSADYVIDLGVAC- 222
              ::|      |....|.:.:.:|.:....||.::|    .|:.|....|......:...|..| 
Mouse   180 SWELH------SLRHCDDDATTENGALAPKQEMASA----GESHEGPGTLNIGVPQLFKYGETCF 234

  Fly   223 ---------EPDKYRCKICSNTYRCLSQLNA---HSQVHRKEKDHQCEVCQKTFRAACNLKTHMR 275
                     .|.:.:..||....:..||.:|   |.::|..||.:.|..|.|.|..:..|..|.|
Mouse   235 PKGRFERKRNPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQR 299

  Fly   276 THTGEKPYQCCYCSRRFADNSTHRKHERLHTNERPYACNICGKTFSLSSSRNAHYYLHSSEK 337
            .|||||||:|..|.:.|:.||....|:|:||.|:||.|..|||::|.||:...|...|::||
Mouse   300 VHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAEK 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 6/36 (17%)
C2H2 Zn finger 229..249 CDD:275368 6/22 (27%)
zf-C2H2 255..277 CDD:278523 7/21 (33%)
C2H2 Zn finger 257..277 CDD:275368 7/19 (37%)
zf-H2C2_2 269..293 CDD:290200 12/23 (52%)
C2H2 Zn finger 285..305 CDD:275368 7/19 (37%)
zf-H2C2_2 299..321 CDD:290200 11/21 (52%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
C2H2 Zn finger 341..359 CDD:275368
Zfp24NP_001344376.1 SCAN 48..159 CDD:128708 18/99 (18%)
COG5048 <249..329 CDD:227381 30/79 (38%)
Necessary and sufficient for nuclear localization. /evidence=ECO:0000250 251..301 16/49 (33%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
COG5048 305..>358 CDD:227381 23/52 (44%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
C2H2 Zn finger 337..357 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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