DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6808 and znf1015

DIOPT Version :9

Sequence 1:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001025341.1 Gene:znf1015 / 562615 ZFINID:ZDB-GENE-050913-139 Length:436 Species:Danio rerio


Alignment Length:134 Identity:50/134 - (37%)
Similarity:73/134 - (54%) Gaps:5/134 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 CKICSNTYRCLSQLNAHSQVHRKEKDHQCEVCQKTFRAACNLKTHMRTHTGEKPYQCCYCSRRFA 293
            |:.|..::.|.:....|.:||..||.:.|..|.|:|....||.:|||.||||||:.|.||.:||:
Zfish   275 CEQCGRSFFCEATYEKHMRVHTGEKPYSCTECGKSFSQKENLTSHMRIHTGEKPFACEYCEKRFS 339

  Fly   294 DNSTHRKHERLHTNERPYACNICGKTFSLSSSRNAHYYLHSSEKSHKCLMCKKEF-----RLKHQ 353
            .....:.|.|:||.|:||.|..|||.|:..:....|...|:.|:.:.|:.|.|.|     :::|.
Zfish   340 QLPALKVHMRVHTGEKPYTCAQCGKGFAQKNGLKIHMRTHTGERPYTCMQCGKNFISKETQIRHM 404

  Fly   354 LTAH 357
            .|.|
Zfish   405 KTHH 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871
C2H2 Zn finger 229..249 CDD:275368 4/19 (21%)
zf-C2H2 255..277 CDD:278523 9/21 (43%)
C2H2 Zn finger 257..277 CDD:275368 9/19 (47%)
zf-H2C2_2 269..293 CDD:290200 15/23 (65%)
C2H2 Zn finger 285..305 CDD:275368 7/19 (37%)
zf-H2C2_2 299..321 CDD:290200 11/21 (52%)
C2H2 Zn finger 313..333 CDD:275368 6/19 (32%)
C2H2 Zn finger 341..359 CDD:275368 7/22 (32%)
znf1015NP_001025341.1 COG5048 73..409 CDD:227381 50/134 (37%)
C2H2 Zn finger 80..100 CDD:275368
C2H2 Zn finger 108..128 CDD:275368
C2H2 Zn finger 136..156 CDD:275368
zf-H2C2_2 149..173 CDD:290200
C2H2 Zn finger 164..184 CDD:275368
zf-H2C2_2 176..200 CDD:290200
C2H2 Zn finger 192..212 CDD:275368
C2H2 Zn finger 220..240 CDD:275368
C2H2 Zn finger 275..295 CDD:275368 4/19 (21%)
zf-H2C2_2 289..312 CDD:290200 9/22 (41%)
C2H2 Zn finger 303..323 CDD:275368 9/19 (47%)
zf-H2C2_2 315..340 CDD:290200 16/24 (67%)
C2H2 Zn finger 331..351 CDD:275368 7/19 (37%)
zf-H2C2_2 343..368 CDD:290200 12/24 (50%)
C2H2 Zn finger 359..379 CDD:275368 6/19 (32%)
zf-H2C2_2 372..396 CDD:290200 7/23 (30%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.