DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6808 and CG4424

DIOPT Version :9

Sequence 1:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:388 Identity:113/388 - (29%)
Similarity:173/388 - (44%) Gaps:78/388 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEISIK-WSMCRTCRKKGTQSTLQSLFESNAHKL---------LISYAGTSVK---PDDGLPDQI 52
            |||.:. .::||||.:.| ::.:.|:|::...:|         :.|.:|..::   .::.||.:|
  Fly     1 MEIRLNMMTLCRTCLQDG-EAHMVSIFQTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPTRI 64

  Fly    53 CTVCLMQLEEVDRFLSACKQSDAHLRSLVRQTLSSASAFETLEDKDQLEQKKRARKQNISGRLIE 117
            |..|...|....:|...|::|:..||..|              .||.:|       |.:...:::
  Fly    65 CLRCKAFLTLAHKFRQICQRSNEFLREYV--------------IKDAVE-------QGVVKEVVQ 108

  Fly   118 E----NPINFKTQENALETTKDDEILPINKFSSDFVFDLNVNAENEKDIHQEDYTISDMDLDREI 178
            :    .|...:|::  || ..:||:|....:|::...:...:...||    |..|:    |..|:
  Fly   109 QTRPSTPPPIETEQ--LE-PPEDEVLEEGVWSTEDPIEETPHGPAEK----ERPTV----LTVEM 162

  Fly   179 SDQNYSETYSQESSAATDSIQETSEDYHNLEPSADYVIDLGVACEPDKYRCKICSNTYRCLSQLN 243
            ....|....|....|...::                        :...:.|.||.|.|...|.|:
  Fly   163 LPAPYPPPASTPPPAPAGAV------------------------KGKLHVCAICGNGYPRKSTLD 203

  Fly   244 AHSQVHRKEKDHQCEVCQKTFRAACNLKTHMRTHTGEKPYQCCYCSRRFADNSTHRKHERLHTNE 308
            .|.:.|..|:.::||:|.|:|.....||.|:|.|||.|||.|.||.|.|||.::..||||.|.||
  Fly   204 THMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNE 268

  Fly   309 RPYACNICGKTFSLSSSRNAHYYLHSSEKSHKCLMCKKEFRLKHQLTAHEKSLAH----RLIA 367
            |||||..|||.|:.:|....||..|:.||.|.|.:|.|.|...|.|.||.::..|    ||.|
  Fly   269 RPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHINDPRLTA 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 20/81 (25%)
C2H2 Zn finger 229..249 CDD:275368 8/19 (42%)
zf-C2H2 255..277 CDD:278523 9/21 (43%)
C2H2 Zn finger 257..277 CDD:275368 9/19 (47%)
zf-H2C2_2 269..293 CDD:290200 14/23 (61%)
C2H2 Zn finger 285..305 CDD:275368 11/19 (58%)
zf-H2C2_2 299..321 CDD:290200 15/21 (71%)
C2H2 Zn finger 313..333 CDD:275368 8/19 (42%)
C2H2 Zn finger 341..359 CDD:275368 8/17 (47%)
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 21/82 (26%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
DUF45 <204..281 CDD:302795 40/76 (53%)
COG5048 210..>345 CDD:227381 58/122 (48%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
C2H2 Zn finger 245..265 CDD:275368 11/19 (58%)
zf-H2C2_2 257..282 CDD:290200 16/24 (67%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 10/23 (43%)
C2H2 Zn finger 301..320 CDD:275368 8/18 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471438
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 120 1.000 Inparanoid score I3338
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.890

Return to query results.
Submit another query.