DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6808 and CG17802

DIOPT Version :9

Sequence 1:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_650659.2 Gene:CG17802 / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster


Alignment Length:439 Identity:103/439 - (23%)
Similarity:175/439 - (39%) Gaps:97/439 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CRTCRKKG----TQSTLQSLFESNAHKLLISYA---GTSVKPDDGLPDQICTVCLMQLEEVDRFL 67
            ||.|   |    ||:.: ::|:.|: |::...|   |..:.....:|..:|:.||:.|:....|.
  Fly     5 CRLC---GDLIYTQNPV-NIFDENS-KMVRQIALVTGLWLTDHSKMPRNMCSCCLLSLKSAIAFR 64

  Fly    68 SACKQSDAHLRSLVRQTLSS----------ASAFETLEDKD-QLEQKKRARKQNISGRLIEENPI 121
            .||.:::..| ::.|:::.:          :.|.|.|:..| ::||:............:||:..
  Fly    65 QACIKTNNRL-TIQRRSVEAKDDGCWADPLSDAHEGLKINDAEVEQEVLYEVSYADNEGLEEDHD 128

  Fly   122 NFKTQENALETTKDDEILPINKFSSDFVFDLNVNAENEKDIHQEDYTISDM-------DLDREIS 179
            .:|.:|...|..:       ||...|...::..:.|:::...|::|  .||       |...|..
  Fly   129 LYKKEEEESEVNE-------NKEFEDIACEIPFSKEDDEQEQQQEY--EDMVDKKTGHDDGEESQ 184

  Fly   180 DQNYSETYSQESSAATDSIQETSEDYHNL--------EPSADYVIDLGV-----ACEPDK----- 226
            :...|:...:||....:..:|:.||...|        :..||.:.|:..     |.:.||     
  Fly   185 ECEESQPDEEESQQNEEDEEESQEDDDELWQNEDGDSDTDADSMSDIEATSRQSALDEDKKPRRK 249

  Fly   227 ------------------------------YRCKICSNTYRCLSQLNAHSQVHRKEKDHQCEVC- 260
                                          :.|..|...:......|.|...|...|..:|..| 
  Fly   250 YTKRSSPKNDDTDFLKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGVKPFECPECG 314

  Fly   261 QKTFRAACNLKTHMRT-HTGEKPYQCCYCSRRFADNSTHRKHE-RLHTNERP---YACNICGKTF 320
            ||.|.... |..|:|. |.|||||.|.:|..||..::...:|| |:|.|::.   :.||.|.|.:
  Fly   315 QKEFNRYI-LNIHIRVKHRGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNYCDKRY 378

  Fly   321 SLSSSRNAHYYLHSSEKSHKCLMCKKEFRLKHQLTAHEKSLAH--RLIA 367
            ..:..|..|..:|:.|::..|.:||..|.....|..|.:|..|  :|||
  Fly   379 ESNYQRAKHEVVHTGERNFHCEVCKVSFTRNSNLKTHYRSRQHQNKLIA 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 20/75 (27%)
C2H2 Zn finger 229..249 CDD:275368 4/19 (21%)
zf-C2H2 255..277 CDD:278523 8/23 (35%)
C2H2 Zn finger 257..277 CDD:275368 8/21 (38%)
zf-H2C2_2 269..293 CDD:290200 12/24 (50%)
C2H2 Zn finger 285..305 CDD:275368 7/20 (35%)
zf-H2C2_2 299..321 CDD:290200 9/25 (36%)
C2H2 Zn finger 313..333 CDD:275368 6/19 (32%)
C2H2 Zn finger 341..359 CDD:275368 6/17 (35%)
CG17802NP_650659.2 zf-AD 4..74 CDD:285071 19/73 (26%)
C2H2 Zn finger 282..302 CDD:275368 4/19 (21%)
C2H2 Zn finger 310..331 CDD:275368 8/21 (38%)
C2H2 Zn finger 339..360 CDD:275368 7/20 (35%)
C2H2 Zn finger 371..388 CDD:275370 5/16 (31%)
zf-met 398..421 CDD:289631 7/22 (32%)
C2H2 Zn finger 399..417 CDD:275368 6/17 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I8018
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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