DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6808 and CG5245

DIOPT Version :9

Sequence 1:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster


Alignment Length:342 Identity:87/342 - (25%)
Similarity:138/342 - (40%) Gaps:54/342 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SYAGTSVKPDDGLPDQICTVCLMQLEEVDRFLSACKQSDAHLRSLVRQTLSSASAFETLEDKDQL 100
            || |..::|..|:|.:               |..||...|..|.|.:||    ..|:..:.    
  Fly    47 SY-GKDLEPVKGVPSK---------------LKTCKSKIAKKRPLRKQT----DTFKCTQC---- 87

  Fly   101 EQKKRARKQNISGRL---IEENPI-------NFKTQENALETTKDDEILP--INKFSSDFVFDLN 153
             ||...||:|:...|   .||.|.       :|..:.:........|..|  .:..|..|    .
  Fly    88 -QKTFTRKENLESHLRLHAEERPFECSHCSKSFGRRTHYKRHLLKHEKRPHKCSHCSKTF----T 147

  Fly   154 VNAENEKDIHQE------DYTISDMDLDREISDQNYSETYSQESSAATDSIQETSEDYHNLEPSA 212
            .|:..::.:|:.      ..|.......|:...|.:..|:|:|........::..::..:|:.  
  Fly   148 QNSSLKQHLHEHTGERPFKCTQCSTSFARKSHLQVHLRTHSEERPFECTHCEKAFKNNSHLQE-- 210

  Fly   213 DYVIDLGVACEPDKYRCKICSNTYRCLSQLNAHSQVHRKEKDHQCEVCQKTFRAACNLKTHMRTH 277
                .|....|...::|..||.:::..|.|..|...| .|:..:|..|.|||....:|:.|:|.|
  Fly   211 ----HLRTHQEARPFKCSHCSKSFKLRSILQKHLLTH-AERSFKCTQCPKTFLQNDSLQIHLRVH 270

  Fly   278 TGEKPYQCCYCSRRFADNSTHRKHERLHTNERPYACNICGKTFSLSSSRNAHYYLHSSEKSHKCL 342
            .||.|::|.:||..||.||..:.|...|..:.|..|:.|..||::.|....|..||:.|:.:||.
  Fly   271 AGEDPFKCPHCSETFARNSRLQLHLLEHAGKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCA 335

  Fly   343 MCKKEFRLKHQLTAHEK 359
            .|.|.|..|..|..|::
  Fly   336 ECSKSFFKKSHLVEHQQ 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 10/42 (24%)
C2H2 Zn finger 229..249 CDD:275368 6/19 (32%)
zf-C2H2 255..277 CDD:278523 8/21 (38%)
C2H2 Zn finger 257..277 CDD:275368 8/19 (42%)
zf-H2C2_2 269..293 CDD:290200 10/23 (43%)
C2H2 Zn finger 285..305 CDD:275368 8/19 (42%)
zf-H2C2_2 299..321 CDD:290200 6/21 (29%)
C2H2 Zn finger 313..333 CDD:275368 6/19 (32%)
C2H2 Zn finger 341..359 CDD:275368 7/17 (41%)
CG5245NP_650197.1 COG5048 74..478 CDD:227381 76/299 (25%)
C2H2 Zn finger 84..104 CDD:275368 6/24 (25%)
C2H2 Zn finger 112..132 CDD:275368 1/19 (5%)
C2H2 Zn finger 139..159 CDD:275368 4/23 (17%)
C2H2 Zn finger 167..187 CDD:275368 3/19 (16%)
zf-H2C2_2 179..204 CDD:290200 4/24 (17%)
C2H2 Zn finger 195..215 CDD:275368 2/25 (8%)
C2H2 Zn finger 223..243 CDD:275368 6/19 (32%)
C2H2 Zn finger 250..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 278..298 CDD:275368 8/19 (42%)
C2H2 Zn finger 306..326 CDD:275368 6/19 (32%)
C2H2 Zn finger 334..354 CDD:275368 7/19 (37%)
C2H2 Zn finger 362..382 CDD:275368
C2H2 Zn finger 390..410 CDD:275368
C2H2 Zn finger 418..438 CDD:275368
C2H2 Zn finger 446..466 CDD:275368
C2H2 Zn finger 474..492 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471459
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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