DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6808 and CG6689

DIOPT Version :9

Sequence 1:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster


Alignment Length:430 Identity:102/430 - (23%)
Similarity:150/430 - (34%) Gaps:134/430 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CRTCRKKGTQS-TLQSLFE-SNA----HKLLISYAGTSVKPDDGLPDQICTVCLMQLEEVDRFLS 68
            ||||....|.. ..:.||: :|:    |..:||....|.|||:  |..:|..|...|::...|..
  Fly   167 CRTCYNDFTADFRAKDLFDPANSVLLFHIEVISGVWISHKPDE--PRLMCPACKSALDQAIDFRE 229

  Fly    69 ACKQSDAHLRSLVRQTLSSASAFETLEDKDQLEQKKRARKQNISGRLIEENPINFKTQENALETT 133
            .|..::..|......|           |:.|:|.:             .||||:           
  Fly   230 MCISTELKLSQAKPST-----------DEVQIEAE-------------NENPIS----------- 259

  Fly   134 KDDEILPINKFSSDFVFDL-NVNAENEKDI---HQEDYTISDMDLDREISDQNYSETYSQESSAA 194
                      ...|.:.|. |.|.|..:|.   |.||...||....:|..|:      ..||.||
  Fly   260 ----------SDHDLISDTENTNVEEIEDAGGDHVEDEATSDDQTSQEAVDE------VAESPAA 308

  Fly   195 TDSI---------QETSEDYHNLE-------------PSA----------------------DYV 215
            .|.:         :|..:.|...|             |.|                      :.:
  Fly   309 QDPLSVALGAKIFKELLDQYTGKEKARLRKGAPIASKPKAKEKAAGEQKPKRSANPKTKEERNLI 373

  Fly   216 IDLGVACEPDKYRCKICSNTYRCLSQLNAHSQVHRKEKDHQCEVCQKTFRAACNLKTHMR-THTG 279
            ....:..:|..:.|..|...:|....|..|...|.:.|::||..|.|||..|.....|:| .|.|
  Fly   374 RRAQLRAKPPNFVCDQCGQAFRMSHNLRIHMLRHTRTKNYQCTECPKTFYDAYMRNMHIRIRHRG 438

  Fly   280 EKPYQCCYCSRRFADNSTHRKHE-RLHT----------NERP---------YACNICGKTFSLSS 324
            |.|:.|.:||..||.....:||| .:|.          |.:|         |.|.:|.|.::...
  Fly   439 ETPFACGFCSETFAYPGARQKHESEVHNAAPRLIVKRINPKPMPKPRESVRYQCKLCQKHYASKY 503

  Fly   325 SRNAHYYLHSSEKSHKCLMCKKEF----RLK-HQLTAHEK 359
            :...|...|:...::||..|.|.:    :|| |::| |||
  Fly   504 ALGWHIKSHTDANAYKCQRCSKSYSDPNKLKRHEMT-HEK 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 22/74 (30%)
C2H2 Zn finger 229..249 CDD:275368 5/19 (26%)
zf-C2H2 255..277 CDD:278523 9/22 (41%)
C2H2 Zn finger 257..277 CDD:275368 8/20 (40%)
zf-H2C2_2 269..293 CDD:290200 9/24 (38%)
C2H2 Zn finger 285..305 CDD:275368 8/20 (40%)
zf-H2C2_2 299..321 CDD:290200 10/41 (24%)
C2H2 Zn finger 313..333 CDD:275368 4/19 (21%)
C2H2 Zn finger 341..359 CDD:275368 8/22 (36%)
CG6689NP_650051.1 THAP 2..96 CDD:283206
zf-AD 167..240 CDD:214871 22/74 (30%)
zf-C2H2 385..407 CDD:278523 5/21 (24%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
zf-H2C2_2 399..422 CDD:290200 8/22 (36%)
C2H2 Zn finger 415..436 CDD:275368 8/20 (40%)
C2H2 Zn finger 444..460 CDD:275368 5/15 (33%)
C2H2 Zn finger 492..512 CDD:275368 4/19 (21%)
C2H2 Zn finger 520..540 CDD:275368 7/20 (35%)
C2H2 Zn finger 547..567 CDD:275368
zf-met 574..597 CDD:289631
C2H2 Zn finger 575..591 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3304
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.860

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