DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zaf1 and topi

DIOPT Version :10

Sequence 1:NP_731602.1 Gene:Zaf1 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_649945.1 Gene:topi / 41199 FlyBaseID:FBgn0037751 Length:814 Species:Drosophila melanogaster


Alignment Length:310 Identity:78/310 - (25%)
Similarity:121/310 - (39%) Gaps:60/310 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 CTVCLMQLEEVDRFLSACKQSDAHLRSLVRQTLSSASAFETLEDKDQLEQKKRARKQNIS-GRLI 116
            ||.|.:|       ::..|::..|              |:|    |.:..::..|..|:: .|..
  Fly   390 CTACDIQ-------MNTAKEASIH--------------FQT----DCIFMREAIRSLNVTLSRYF 429

  Fly   117 EENPINFKTQENALETTKDDEILPINKFSSDFVFD-LNVNAENEKDIHQEDYTISDMDLDREISD 180
            ..|....|        ..:.::|..::.:|...|. ||.|.:.             :.|..:..|
  Fly   430 VCNVCELK--------FANTDLLQEHRCTSFHYFPRLNENGKK-------------LLLPCDFCD 473

  Fly   181 QNYSETYSQESSAATDSIQETSEDYHNLEPSADYVIDLGVACEPDKYRCKICSNTYRCLSQLNAH 245
            .|:        ..|.|.:..:.|.:.|.:.......:.| |....:|.|.||..:|...|.|..|
  Fly   474 VNF--------EFAHDFLAHSEEKHLNKKKREKETRNTG-AGRIRQYLCDICGKSYTQSSHLWQH 529

  Fly   246 SQVHRKEKDHQC--EVCQKTFRAACNLKTHMR-THTGEKPYQCCYCSRRFADNSTHRKHERLHTN 307
            .:.|:..|...|  |.|.:.|....:|..|:| .||||:||.|..|.:||...|...:|..:|..
  Fly   530 LRFHQGVKPFVCQEENCDRKFTIRPDLNDHIRKCHTGERPYLCLVCGKRFLTGSVFYQHRLIHRG 594

  Fly   308 ERPYACNICGKTFSLSSSRNAHYYLHSSEKSHKCLMCKKEFRLKHQLTAH 357
            ||.|.|..|||.|..:.:...|..:|:.||.:.||.|.|.||.:.....|
  Fly   595 ERRYECEECGKRFYRADALKNHQRIHTGEKPYSCLFCTKTFRQRGDRDKH 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zaf1NP_731602.1 zf-AD 9..79 CDD:214871 6/25 (24%)
SFP1 <161..320 CDD:227516 46/161 (29%)
C2H2 Zn finger 229..249 CDD:275368 7/19 (37%)
C2H2 Zn finger 257..277 CDD:275368 7/22 (32%)
zf-H2C2_2 269..293 CDD:463886 12/24 (50%)
C2H2 Zn finger 285..305 CDD:275368 6/19 (32%)
C2H2 Zn finger 313..333 CDD:275368 6/19 (32%)
C2H2 Zn finger 341..359 CDD:275368 7/17 (41%)
topiNP_649945.1 C2H2 Zn finger 230..250 CDD:275370
C2H2 Zn finger 277..297 CDD:275370
C2H2 Zn finger 431..453 CDD:275368 4/29 (14%)
COG5048 <450..647 CDD:227381 63/217 (29%)
C2H2 Zn finger 469..490 CDD:275368 5/28 (18%)
C2H2 Zn finger 513..564 CDD:275368 16/50 (32%)
C2H2 Zn finger 541..561 CDD:275368 6/19 (32%)
C2H2 Zn finger 572..592 CDD:275368 6/19 (32%)
C2H2 Zn finger 600..620 CDD:275368 6/19 (32%)
zf-H2C2_2 612..637 CDD:463886 9/24 (38%)
C2H2 Zn finger 628..646 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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