DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6808 and klu

DIOPT Version :9

Sequence 1:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001261690.1 Gene:klu / 39228 FlyBaseID:FBgn0013469 Length:818 Species:Drosophila melanogaster


Alignment Length:112 Identity:36/112 - (32%)
Similarity:50/112 - (44%) Gaps:8/112 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 CEVCQKTFRAACNLKTHMRT-HTGEKP-------YQCCYCSRRFADNSTHRKHERLHTNERPYAC 313
            |..|.:.|.....|..||.: |....|       |.|..|.|.||.:....:|.||||..:||.|
  Fly   592 CPTCGQMFSLHDRLAKHMASRHKSRNPANDIAKAYSCDVCRRSFARSDMLTRHMRLHTGVKPYTC 656

  Fly   314 NICGKTFSLSSSRNAHYYLHSSEKSHKCLMCKKEFRLKHQLTAHEKS 360
            .:||:.||.|...:.|...|:.||.:||..|......:..:|.|.::
  Fly   657 KVCGQVFSRSDHLSTHQRTHTGEKPYKCPQCPYAACRRDMITRHMRT 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871
C2H2 Zn finger 229..249 CDD:275368
zf-C2H2 255..277 CDD:278523 6/20 (30%)
C2H2 Zn finger 257..277 CDD:275368 6/20 (30%)
zf-H2C2_2 269..293 CDD:290200 9/31 (29%)
C2H2 Zn finger 285..305 CDD:275368 7/19 (37%)
zf-H2C2_2 299..321 CDD:290200 10/21 (48%)
C2H2 Zn finger 313..333 CDD:275368 7/19 (37%)
C2H2 Zn finger 341..359 CDD:275368 4/17 (24%)
kluNP_001261690.1 FYDLN_acid <182..248 CDD:302856
C2H2 Zn finger 592..613 CDD:275368 6/20 (30%)
COG5048 607..>687 CDD:227381 29/79 (37%)
zf-C2H2 626..648 CDD:278523 8/21 (38%)
C2H2 Zn finger 628..648 CDD:275368 7/19 (37%)
zf-H2C2_2 640..665 CDD:290200 11/24 (46%)
C2H2 Zn finger 656..676 CDD:275368 7/19 (37%)
zf-H2C2_2 668..690 CDD:290200 7/21 (33%)
C2H2 Zn finger 684..704 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24381
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.