DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6808 and Kr

DIOPT Version :9

Sequence 1:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001261181.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster


Alignment Length:354 Identity:96/354 - (27%)
Similarity:142/354 - (40%) Gaps:80/354 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LSACKQSDAHL-RSLV----------------------RQTLSSASAFETLEDKDQLEQKKRAR- 107
            |:..||.|.|| ||:.                      .|..::||||..|.....|...::|. 
  Fly    18 LAGIKQEDVHLDRSMSLSPPMSANTSATSAAAIYPAMGLQQAAAASAFGMLSPTQLLAANRQAAA 82

  Fly   108 ------KQNISGRLIEENPINF---------------------KTQENALETTKDDEILPINKFS 145
                  ...::..|...||...                     .:..:.|.|.......|:|..:
  Fly    83 FMAQLPMSTLANTLFPHNPAALFGAWAAQQSLPPQGTHLHSPPASPHSPLSTPLGSGKHPLNSPN 147

  Fly   146 S--------DFVFDLNVNAENEKDIHQEDYTISDMDLDREISDQNYSETYSQESSAATDSIQETS 202
            |        .....|:|..|.:.:|   ..:::||          |..:....|..::.|...::
  Fly   148 STPQHHEPAKKARKLSVKKEFQTEI---SMSVNDM----------YHTSGGPISPPSSGSSPNST 199

  Fly   203 EDYHNLEPSADYVIDLGVACEPDK---YRCKICSNTYRCLSQLNAHSQVHRKEKDHQCEVCQKTF 264
            .|  ....:|..|   ||:.:|.:   :.|||||.::.....|..|.:.|..||..:|..|.|.|
  Fly   200 HD--GAGGNAGCV---GVSKDPSRDKSFTCKICSRSFGYKHVLQNHERTHTGEKPFECPECHKRF 259

  Fly   265 RAACNLKTHMRTHTGEKPYQCCYCSRRFADNSTHRKHERLHTNERPYACNICGKTFSLSSSRNAH 329
            ....:||||||.|||||||.|.:|.|:|...:..|:|.|:||.||||.|.||...||.|:...:|
  Fly   260 TRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYTCEICDGKFSDSNQLKSH 324

  Fly   330 YYLHSSEKSHKCLMCKKEFRLKHQLTAHE 358
            ..:|:.||..:|..|..:||.:|.|..|:
  Fly   325 MLVHNGEKPFECERCHMKFRRRHHLMNHK 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 6/12 (50%)
C2H2 Zn finger 229..249 CDD:275368 7/19 (37%)
zf-C2H2 255..277 CDD:278523 10/21 (48%)
C2H2 Zn finger 257..277 CDD:275368 10/19 (53%)
zf-H2C2_2 269..293 CDD:290200 16/23 (70%)
C2H2 Zn finger 285..305 CDD:275368 7/19 (37%)
zf-H2C2_2 299..321 CDD:290200 12/21 (57%)
C2H2 Zn finger 313..333 CDD:275368 7/19 (37%)
C2H2 Zn finger 341..359 CDD:275368 7/18 (39%)
KrNP_001261181.1 C2H2 Zn finger 224..244 CDD:275368 7/19 (37%)
zf-H2C2_2 237..261 CDD:290200 9/23 (39%)
C2H2 Zn finger 252..272 CDD:275368 10/19 (53%)
zf-H2C2_2 264..289 CDD:290200 17/24 (71%)
C2H2 Zn finger 280..300 CDD:275368 7/19 (37%)
zf-H2C2_2 292..316 CDD:290200 12/23 (52%)
C2H2 Zn finger 308..328 CDD:275368 7/19 (37%)
zf-H2C2_2 321..345 CDD:290200 7/23 (30%)
C2H2 Zn finger 336..352 CDD:275368 6/15 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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