DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14710 and trem

DIOPT Version :9

Sequence 1:NP_650092.4 Gene:CG14710 / 41393 FlyBaseID:FBgn0037920 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster


Alignment Length:441 Identity:128/441 - (29%)
Similarity:210/441 - (47%) Gaps:56/441 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CRICLGDFEESQMIC--LFGDKGESDLRKKLELCCRIRVRQSPQLPEKACNSCCEFVQMWFNFRQ 72
            ||:||.:..|.:.:.  :|.:...:.|.:.|.:|..|.|......|:|.|:.|...:::.:.||.
  Fly    12 CRVCLNNPSEGEELLHDIFSETASTRLDQMLHICAGIPVSLDDNFPDKMCSKCVRCLRLCYKFRL 76

  Fly    73 MCLNSQVY------WETSSSE---RPEALAQASD--AEYMLYLYENLHLKL-------GTENQEK 119
            .|..|..:      .|.|::.   ..:.|:.|.|  .|.:|..:|:...:|       |.|:|:.
  Fly    77 TCQRSHQHIMDMLDREASNANAAGEGDLLSIAEDLSVESVLKSWEDYASQLDGGMKVEGEEDQQH 141

  Fly   120 EEIT-AIEEGDEQQEDQSQEVLDFNGFIINESIEEDEEPNTESPEQILISHMDSYVDDQQMEELI 183
            :.|| .:|:||..         |.|.|.::       :|....|.:  |...::|.:.::.|.|.
  Fly   142 QVITYVVEDGDTD---------DTNMFDVH-------DPTQPVPNE--IEEAETYAEYEEYELLT 188

  Fly   184 DDKG-ELVEELSNANTFYEVEYGDEELLMSSAPSPHPSFKMDKQKPGR----PRKPDAELKFKRK 243
            ::.. |:.:|..:..|....|...||.:..........:.....||.:    .|||.|..|...|
  Fly   189 NENSPEIAQEKGSTGTDVATEEPPEEEIAEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPK 253

  Fly   244 -DINAKERGNQPKCKEEEKFMCILCGNVFYKKSVFTAHMMTHSEYKPHQCEICNKSFRQMGELRA 307
             :...|:.|.:|:.| ...::|.:|||::..::..|.||..||..|||:||||.:.|.|..:|..
  Fly   254 VETFKKKVGRKPRNK-LSTYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVR 317

  Fly   308 HIRRHTGDRPYKCMYCDRHFYDRSERVRHERVHTNTRPYACQECGKTFTHTAILKNHILSHSAQK 372
            |:..|||:|||||.||...|.|||.:.:|.|:||..|||.|..|.:|||::..||.|.:.|:.:|
  Fly   318 HMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIHTGEK 382

  Fly   373 NYNCGICCKSFTLLHQLKAHLQT----LTHRNKMEQTIPS------SPEML 413
            .:.|.:|.|.|...::|:.|.:|    :|.||..|::..:      :||.|
  Fly   383 PHVCDLCGKGFVKAYKLRLHRETHNRRITWRNDAEESTKAEDVKGETPEFL 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14710NP_650092.4 zf-AD 9..83 CDD:285071 19/80 (24%)
COG5048 <261..395 CDD:227381 57/133 (43%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
zf-C2H2 290..312 CDD:278523 9/21 (43%)
C2H2 Zn finger 292..312 CDD:275368 8/19 (42%)
zf-H2C2_2 304..327 CDD:290200 12/22 (55%)
C2H2 Zn finger 320..340 CDD:275368 9/19 (47%)
zf-H2C2_2 335..357 CDD:290200 11/21 (52%)
C2H2 Zn finger 348..368 CDD:275368 8/19 (42%)
C2H2 Zn finger 376..395 CDD:275368 6/18 (33%)
tremNP_650861.1 zf-AD 11..87 CDD:214871 19/74 (26%)
COG5048 <264..411 CDD:227381 60/147 (41%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
zf-H2C2_2 287..311 CDD:290200 13/23 (57%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
zf-H2C2_2 315..338 CDD:290200 12/22 (55%)
C2H2 Zn finger 330..350 CDD:275368 9/19 (47%)
zf-H2C2_2 345..367 CDD:290200 11/21 (52%)
C2H2 Zn finger 358..378 CDD:275368 8/19 (42%)
zf-H2C2_2 370..394 CDD:290200 8/23 (35%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3C1GA
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006293
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23226
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.960

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