DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14710 and CG4854

DIOPT Version :9

Sequence 1:NP_650092.4 Gene:CG14710 / 41393 FlyBaseID:FBgn0037920 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster


Alignment Length:399 Identity:111/399 - (27%)
Similarity:179/399 - (44%) Gaps:94/399 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LQCRICLGDFEESQMICLFGDKGESDLRKKLELCCRIRVRQSPQLPEKACNSCCEFVQMWFNFRQ 72
            |:|||||...::..::     ..|.|...|::.|..:.:.:||..|.:.|.||...::.....|.
  Fly    10 LKCRICLVQPKDESLM-----PTEPDFPDKIKRCTGVELSESPDWPNRICTSCALLLRAALKLRS 69

  Fly    73 MCLNSQVYWETSSSERPEALAQASDAEYMLYLYENLHLKLGTENQEKEEITAIEEGDEQQEDQSQ 137
            :|                   |.::.:              .:.|:.:||......|||:..:..
  Fly    70 LC-------------------QQTEKD--------------LKEQKLQEINIEIVHDEQETKKKT 101

  Fly   138 EVLDFNGFIINESIEEDEEPNTESPEQILISHMDSY-VDDQQMEELIDDKGELV--EELSNANTF 199
            |..|.:.   ||:...|.|...|        ::||| |..:..|::.....|||  |...:|   
  Fly   102 ESRDLSK---NEATGSDSELEYE--------YLDSYDVTLESSEDVACSADELVSIEPAISA--- 152

  Fly   200 YEVEYGDEELLMSSAPSPHPSFKMDKQKPGRPRKPDAELKFKRKDINAKERGNQPKCKEEEKFMC 264
                  .||.:.|.:|.|                    :.|:.:|..           :...|.|
  Fly   153 ------PEESVYSLSPKP--------------------VTFEDEDSG-----------QAASFTC 180

  Fly   265 ILCGNVFYKKSVFTAHMMTHSEYKPHQCEICNKSFRQMGELRAHIRRHTGDRPYKCMYCDRHFYD 329
            .:|.||:.::...|.||..||..|||:||||:|.|||..:|..|:..|||:|||||.|||..|.|
  Fly   181 NICNNVYSERVKLTNHMKVHSAKKPHECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFAD 245

  Fly   330 RSERVRHERVHTNTRPYACQECGKTFTHTAILKNHILSHSAQKNYNCGICCKSFTLLHQLKAHLQ 394
            .|.|::|:|:|||.|||.|:.|.::|.::.:|:.|:.:|:.::.::|..|.|||:.||...:|.:
  Fly   246 PSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEK 310

  Fly   395 TLTHRNKME 403
              :|:...|
  Fly   311 --SHKRTKE 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14710NP_650092.4 zf-AD 9..83 CDD:285071 17/73 (23%)
COG5048 <261..395 CDD:227381 60/133 (45%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
zf-C2H2 290..312 CDD:278523 11/21 (52%)
C2H2 Zn finger 292..312 CDD:275368 10/19 (53%)
zf-H2C2_2 304..327 CDD:290200 13/22 (59%)
C2H2 Zn finger 320..340 CDD:275368 10/19 (53%)
zf-H2C2_2 335..357 CDD:290200 11/21 (52%)
C2H2 Zn finger 348..368 CDD:275368 5/19 (26%)
C2H2 Zn finger 376..395 CDD:275368 8/18 (44%)
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 13/49 (27%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
zf-H2C2_2 193..217 CDD:290200 14/23 (61%)
COG5048 201..>258 CDD:227381 32/56 (57%)
C2H2 Zn finger 208..228 CDD:275368 10/19 (53%)
zf-H2C2_2 221..244 CDD:290200 13/22 (59%)
C2H2 Zn finger 236..256 CDD:275368 10/19 (53%)
zf-H2C2_2 251..273 CDD:290200 11/21 (52%)
C2H2 Zn finger 264..284 CDD:275368 5/19 (26%)
zf-H2C2_2 277..301 CDD:290200 8/23 (35%)
C2H2 Zn finger 292..312 CDD:275368 8/21 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3C1GA
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006293
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23226
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.960

Return to query results.
Submit another query.