DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14710 and scrt

DIOPT Version :10

Sequence 1:NP_650092.4 Gene:CG14710 / 41393 FlyBaseID:FBgn0037920 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_523911.2 Gene:scrt / 38469 FlyBaseID:FBgn0004880 Length:653 Species:Drosophila melanogaster


Alignment Length:181 Identity:53/181 - (29%)
Similarity:79/181 - (43%) Gaps:8/181 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 KRK---DINAKERGNQPKCKEEEKFMCILCGNVFYKKSVFTAHMMTH---SEYKPHQCEICNKSF 299
            |||   |..|...|.....:::.|:.|..||..:...|..:.|..||   ......:|..|.|::
  Fly   443 KRKHVADPAAAASGVPTPDQQKTKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCHTCGKAY 507

  Fly   300 RQMGELRAHIRRHTGDRPYKCMYCDRHFYDRSERVRHERVHTNTRPYACQECGKTFTHTAILKNH 364
            ..|..|..|:..|  ...:.|..|.:.|........|.|.||..:||.|..|||.|...:.|:.|
  Fly   508 VSMPALAMHLLTH--KLSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAH 570

  Fly   365 ILSHSAQKNYNCGICCKSFTLLHQLKAHLQTLTHRNKMEQTIPSSPEMLES 415
            :.:||..||:.|..|.|:|.|...|..||::...:::.|..:..|..|.:|
  Fly   571 MQTHSVDKNFECKRCHKTFALKSYLNKHLESACLKDEEELMMSMSLSMHDS 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14710NP_650092.4 zf-AD 9..84 CDD:462262
COG5048 <261..395 CDD:227381 43/136 (32%)
C2H2 Zn finger 264..284 CDD:275368 5/19 (26%)
C2H2 Zn finger 292..312 CDD:275368 6/19 (32%)
C2H2 Zn finger 320..340 CDD:275368 5/19 (26%)
C2H2 Zn finger 348..368 CDD:275368 7/19 (37%)
C2H2 Zn finger 376..395 CDD:275368 8/18 (44%)
scrtNP_523911.2 zf-C2H2 467..489 CDD:395048 5/21 (24%)
C2H2 Zn finger 469..489 CDD:275370 5/19 (26%)
C2H2 Zn finger 500..520 CDD:275368 6/19 (32%)
C2H2 Zn finger 526..546 CDD:275368 5/19 (26%)
zf-H2C2_2 539..562 CDD:463886 10/22 (45%)
C2H2 Zn finger 554..574 CDD:275368 7/19 (37%)
zf-C2H2 554..574 CDD:395048 7/19 (37%)
zf-H2C2_2 566..590 CDD:463886 9/23 (39%)
C2H2 Zn finger 582..599 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.

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