DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14710 and LOC116407624

DIOPT Version :10

Sequence 1:NP_650092.4 Gene:CG14710 / 41393 FlyBaseID:FBgn0037920 Length:415 Species:Drosophila melanogaster
Sequence 2:XP_031749168.1 Gene:LOC116407624 / 116407624 XenbaseID:XB-GENE-29092855 Length:1315 Species:Xenopus tropicalis


Alignment Length:153 Identity:59/153 - (38%)
Similarity:76/153 - (49%) Gaps:2/153 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 KEEEKFMCILCGNVFYKKSVFTAHMMTHSEYKPHQCEICNKSFRQMGELRAHIRRHTGDRPYKCM 321
            |||..|.|..||..:...|..|.|...|:..:|..|..|.|||.....|..|.|.|||:||:.|:
 Frog   324 KEERPFACSQCGKCYKHHSDLTNHYRIHTGERPFICSACGKSFTSRQILSQHFRCHTGERPFTCL 388

  Fly   322 YCDRHFYDRSERVRHERVHTNTRPYACQECGKTFTHTAILKNHILSHSAQKNYNCGICCKSFTLL 386
            .|.:.|...|....|:|:||..:||.|.||||.||..:.||.|...|:.:|.|.|..|.|||...
 Frog   389 ECGKSFTRCSSLTEHKRMHTGEKPYPCSECGKCFTKRSSLKEHKRIHTGEKPYICSECGKSFIKC 453

  Fly   387 HQLKAHLQTLTHRNKMEQTIPSS 409
            .:|..|.:  :|..:...|..||
 Frog   454 SRLTEHYR--SHTGEKPHTCESS 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14710NP_650092.4 zf-AD 9..84 CDD:462262
COG5048 <261..395 CDD:227381 52/133 (39%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 292..312 CDD:275368 8/19 (42%)
C2H2 Zn finger 320..340 CDD:275368 6/19 (32%)
C2H2 Zn finger 348..368 CDD:275368 10/19 (53%)
C2H2 Zn finger 376..395 CDD:275368 7/18 (39%)
LOC116407624XP_031749168.1 C2H2 Zn finger 135..155 CDD:275368
COG5048 <150..366 CDD:227381 15/41 (37%)
C2H2 Zn finger 163..183 CDD:275368
C2H2 Zn finger 191..211 CDD:275368
C2H2 Zn finger 219..239 CDD:275368
C2H2 Zn finger 247..267 CDD:275368
C2H2 Zn finger 275..294 CDD:275368
COG5048 <299..450 CDD:227381 51/125 (41%)
C2H2 Zn finger 303..323 CDD:275368
C2H2 Zn finger 331..351 CDD:275368 6/19 (32%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 10/19 (53%)
C2H2 Zn finger 443..463 CDD:275368 7/21 (33%)
KRAB_A-box 611..>641 CDD:470626
COG5048 818..1245 CDD:227381
C2H2 Zn finger 822..842 CDD:275368
C2H2 Zn finger 850..870 CDD:275368
C2H2 Zn finger 878..898 CDD:275368
C2H2 Zn finger 906..926 CDD:275368
C2H2 Zn finger 934..954 CDD:275368
C2H2 Zn finger 962..982 CDD:275368
C2H2 Zn finger 1015..1034 CDD:275368
C2H2 Zn finger 1042..1062 CDD:275368
C2H2 Zn finger 1070..1090 CDD:275368
C2H2 Zn finger 1098..1118 CDD:275368
C2H2 Zn finger 1126..1146 CDD:275368
C2H2 Zn finger 1154..1174 CDD:275368
C2H2 Zn finger 1182..1202 CDD:275368
C2H2 Zn finger 1210..1230 CDD:275368
C2H2 Zn finger 1238..1258 CDD:275368
zf-H2C2_2 1251..1275 CDD:463886
C2H2 Zn finger 1266..1286 CDD:275368
zf-H2C2_2 1278..1303 CDD:463886
C2H2 Zn finger 1294..1314 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.